RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 C2orf73Q8N5S3 287 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 POU5F2Q8N7G0 328 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 ZFPM2Q8WW38 1151 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 LCN9Q8WX39 176 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 SLC7A6OSQ96CW6 309 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 ACPTQ9BZG2 426 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 XKR8Q9H6D3 395 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 LRTM1Q9HBL6 345 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 PRM3Q9NNZ6 103 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 C1orf109Q9NX04 203 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 NOP53Q9NZM5 478 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 SPASTQ9UBP0 616 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 CCL27Q9Y4X3 112 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 PCDHB11Q9Y5F2 797 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 LOC400499M0QZD8 3231 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 ADAMTS20P59510 1910 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 NPIPB8E9PQR5 432 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 VIPP01282 170 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 PCNAP12004 261 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 XRCC1P18887 633 aaPredicted RBP13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 PRPH2P23942 346 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 CPA2P48052 419 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 CSNK1EP49674 416 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 ACADVLP49748 655 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 RPL38P63173 70 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 GRIK2Q13002 908 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 CYLC2Q14093 348 aaPredicted RBP13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 PLCL1Q15111 1095 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 PDCD4Q53EL6 469 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 AGKQ53H12 422 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 ICE2Q659A1 982 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 IYDQ6PHW0 289 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 PRR23BQ6ZRT6 265 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 ASRGL1Q7L266 308 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 GKN2Q86XP6 184 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 SYT12Q8IV01 421 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 PARP9Q8IXQ6 854 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 LAS2Q8IYD9 372 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 SDR16C5Q8N3Y7 309 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 LINC01555Q8NAE3 123 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 AVL9Q8NBF6 648 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 WDR20Q8TBZ3 569 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 GATA6Q92908 595 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 MTFMTQ96DP5 389 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 AIF1LQ9BQI0 150 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 C1orf50Q9BV19 199 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 ACAT2Q9BWD1 397 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 ERVMER34-1Q9H9K5 563 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 BRF2Q9HAW0 419 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 SDR39U1Q9NRG7 319 aaPredicted RBP13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 GEMIN8Q9NWZ8 242 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 OR6C2Q9NZP2 312 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 PILRBQ9UKJ0 227 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 EIF3LQ9Y262 564 aaKnown RBP13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 POLR3HQ9Y535 204 aaPredicted RBP13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 GON4LQ3T8J9 2241 aa13.33□□□□□ -0.28
PDLIM5-203ENST00000359265 AKAP13Q12802 2813 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 B2RBV5 119 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 GYG2O15488 501 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 SEC22BO75396 215 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 CELA2BP08218 269 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 PCSK2P16519 638 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 GPX3P22352 226 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 PSMB5P28074 263 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 MAPK1P28482 360 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 CCR8P51685 355 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 NEK2P51955 445 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 HNRNPKP61978 463 aaKnown RBP eCLIP13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 ABATP80404 500 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 REEP5Q00765 189 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 HMGCS1Q01581 520 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 C1orf61Q13536 156 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 CUL3Q13618 768 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 DDX39BQ13838 428 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 PEAR1Q5VY43 1037 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 GK5Q6ZS86 529 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 SLC9B2Q86UD5 537 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 AMIGO1Q86WK6 493 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 RBM12BQ8IXT5 1001 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 ABHD11Q8NFV4 315 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 OR7G3Q8NG95 312 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 CEP76Q8TAP6 659 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 ZDHHC1Q8WTX9 485 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 CMTM7Q96FZ5 175 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 RAB3IPQ96QF0 476 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 BTBD10Q9BSF8 475 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 BRINP2Q9C0B6 783 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 PITHD1Q9GZP4 211 aaPredicted RBP13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 SRMSQ9H3Y6 488 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 TMEM45AQ9NWC5 275 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 NMRK1Q9NWW6 199 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 ASIC5Q9NY37 505 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 ZIM2Q9NZV7 527 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 CPNE7Q9UBL6 633 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 ADGRE2Q9UHX3 823 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 RAB23Q9ULC3 237 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 DOLKQ9UPQ8 538 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 TSC22D4Q9Y3Q8 395 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 GPR45Q9Y5Y3 372 aa13.32□□□□□ -0.28
PDLIM5-203ENST00000359265 MDC1Q14676 2089 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms