RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 PCDHGA12O60330 932 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 TNFRSF21O75509 655 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 TSPAN12O95859 305 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 PRLP01236 227 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 RETP07949 1114 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SUOXP51687 545 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 CLCN7P51798 805 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 ALDH6A1Q02252 535 aaKnown RBP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SELENBP1Q13228 472 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SLC14A1Q13336 389 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 IL18R1Q13478 541 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 PCBP2Q15366 365 aaKnown RBP eCLIP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 IER5LQ5T953 404 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 FUT10Q6P4F1 479 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 TMPRSS11AQ6ZMR5 421 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SLC24A5Q71RS6 500 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 DEFB128Q7Z7B8 93 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 IPCEF1Q8WWN9 437 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 PEX13Q92968 403 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 PTPN18Q99952 460 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 CENPOQ9BU64 300 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 C2orf49Q9BVC5 232 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 MMP27Q9H306 513 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 AKIP1Q9NQ31 210 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 TRPV5Q9NQA5 729 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 RPRD1BQ9NQG5 326 aaKnown RBP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 THG1LQ9NWX6 298 aaKnown RBP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 IL17CQ9P0M4 197 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 PCDHGB3Q9Y5G1 929 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 PEX16Q9Y5Y5 336 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 RLFQ13129 1914 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 CCDC182A6NF36 153 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 COCHO43405 550 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 SMAD6O43541 496 aaKnown RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 DUSP11O75319 330 aaKnown RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 IGSF6O95976 241 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 TSPAN19P0C672 248 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 ETFAP13804 333 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 PRKAG1P54619 331 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 CLDN8P56748 225 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 AGAP7PQ5VUJ5 663 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 IRAK1BP1Q5VVH5 260 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 AFMIDQ63HM1 303 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 RFLNAQ6ZTI6 216 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 PRSS48Q7RTY5 328 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 GALNT7Q86SF2 657 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 RAB43Q86YS6 212 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 ZZZ3Q8IYH5 903 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 DEPDC4Q8N2C3 294 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 HJURPQ8NCD3 748 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 NFKBIDQ8NI38 313 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 DIRAS2Q96HU8 199 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 FOPNLQ96NB1 174 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 CPPED1Q9BRF8 314 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 CLMPQ9H6B4 373 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 TBC1D14Q9P2M4 693 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 LSM7Q9UK45 103 aaKnown RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 OARD1Q9Y530 152 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 C2orf78A6NCI8 922 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 WNT9AO14904 365 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 TGFB1P01137 390 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 PRR35P0CG20 571 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 IFI30P13284 250 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 SPNP16150 400 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 PRPS1L1P21108 318 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 RYKP34925 604 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 HNF1BP35680 557 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 PTPN5P54829 565 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 SLC35A2P78381 396 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 MEF2AQ02078 507 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 MVKQ03426 396 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 C1DQ13901 141 aaKnown RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 BTG3Q14201 252 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 TIMM50Q3ZCQ8 353 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 ADGRF1Q5T601 910 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 SPRYD7Q5W111 196 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 TNFAIP8L2Q6P589 184 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 RRM2BQ7LG56 351 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 TSPYL5Q86VY4 417 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 LYSMD2Q8IV50 215 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 MSRB3Q8IXL7 192 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 METTL4Q8N3J2 472 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 PARP16Q8N5Y8 322 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 ST13P5Q8NFI4 369 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 FKBP10Q96AY3 582 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 PHF21AQ96BD5 680 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 C1GALT1C1Q96EU7 318 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 CNDP2Q96KP4 475 aaKnown RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 IL1RAPQ9NPH3 570 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 IL26Q9NPH9 171 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 CRNNQ9UBG3 495 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 VPS29Q9UBQ0 182 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 TMEFF2Q9UIK5 374 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-203ENST00000358528 PRKAB1Q9Y478 270 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 PCDHGB6Q9Y5F9 930 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 AGAP5A6NIR3 686 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 GADD45GO95257 159 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 FHP07954 510 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 SLC10A3P09131 477 aa6.36□□□□□ -1.39
CSDE1-203ENST00000358528 BMP1P13497 986 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms