RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 CISD3P0C7P0 127 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 ADH5P11766 374 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 JUPP14923 745 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 NUBP1P53384 320 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 ZNF33BQ06732 778 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 CHIT1Q13231 466 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 TUBA3CQ13748 450 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 GTDC1Q4AE62 458 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 SYTL3Q4VX76 610 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 OTUD3Q5T2D3 398 aaPredicted RBP13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 FRG2Q64ET8 278 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 KCTD8Q6ZWB6 473 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 CYP2U1Q7Z449 544 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 THAP5Q7Z6K1 395 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 STK32CQ86UX6 486 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 B4GALNT2Q8NHY0 566 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 WFIKKN2Q8TEU8 576 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 EZH1Q92800 747 aaPredicted RBP13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 FAM162AQ96A26 154 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 TESCQ96BS2 214 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 APIPQ96GX9 242 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 FRG2BQ96QU4 278 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 RBM4BQ9BQ04 359 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 CPPED1Q9BRF8 314 aaPredicted RBP13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 RBM4Q9BWF3 364 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 KAT8Q9H7Z6 458 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 DCAF13Q9NV06 445 aaKnown RBP13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 INVSQ9Y283 1065 aa13.82□□□□□ -0.2
NIPAL3-203ENST00000358028 FAM170BA6NMN3 283 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 ARHGEF33A8MVX0 844 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 TSPAN6O43657 245 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 NOL3O60936 208 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 PSIP1O75475 530 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 CLIC3O95833 236 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 ADH1CP00326 375 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 SDC1P18827 310 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 RPL10P27635 214 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 MAP4P27816 1152 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 MMP12P39900 470 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 OPRD1P41143 372 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 DGKGP49619 791 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 PHC1P78364 1004 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 ABRQ12979 859 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 PMS2P3Q13401 168 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 FZD5Q13467 585 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 TOP3AQ13472 1001 aaPredicted RBP13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 RAB39AQ14964 217 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 BROXQ5VW32 411 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 C8orf59Q8N0T1 100 aaPredicted RBP13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 TMEM132CQ8N3T6 1108 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 RASGEF1AQ8N9B8 481 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 ZNF555Q8NEP9 628 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 FAM81AQ8TBF8 368 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 HDAC2Q92769 488 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 GLMNQ92990 594 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 GLYATL1Q969I3 302 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 MAGED4Q96JG8 741 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 FCRL1Q96LA6 429 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 MUS81Q96NY9 551 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 TSSK3Q96PN8 268 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 OSBPL10Q9BXB5 764 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 ING2Q9H160 280 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 PLGRKTQ9HBL7 147 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 SERHLQ9NQF3 203 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 FAM8A1Q9UBU6 413 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 PPT2Q9UMR5 302 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 SIT1Q9Y3P8 196 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 CROCCQ5TZA2 2017 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 TMEM202A6NGA9 273 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 WNT9AO14904 365 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 UGDHO60701 494 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 ATG13O75143 517 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 CST1P01037 141 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 HOXB9P17482 250 aaPredicted RBP13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 AMD1P17707 334 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 TACR1P25103 407 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 PRLHRP49683 370 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 CTSCP53634 463 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 GABARAPL2P60520 117 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 PPP2R2BQ00005 443 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 MESP2Q0VG99 397 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 CSTF3Q12996 717 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 BIRC2Q13490 618 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 ACOX1Q15067 660 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 RFX4Q33E94 735 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 POM121L1PQ3SYA9 428 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 LIPJQ5W064 366 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 ERAP2Q6P179 960 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 ENPP6Q6UWR7 440 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 LIPIQ6XZB0 460 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 PARS2Q7L3T8 475 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 KLHDC8AQ8IYD2 350 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 ZCCHC7Q8N3Z6 543 aaKnown RBP13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 OR5K1Q8NHB7 308 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 FBXO30Q8TB52 745 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 NRBF2Q96F24 287 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 APOLD1Q96LR9 279 aa13.81□□□□□ -0.2
NIPAL3-203ENST00000358028 CARS2Q9HA77 564 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms