RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ACTR1AP61163 376 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 ADAM8P78325 824 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 KCNC4Q03721 635 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 PUDPQ08623 228 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 RBBP4Q09028 425 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 ELOA3BQ3SY89 546 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 ZNF773Q6PK81 442 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 AGTRAPQ6RW13 159 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 HACD2Q6Y1H2 254 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 FAM129CQ86XR2 697 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 NXPE1Q8N323 547 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 ELOA3Q8NG57 546 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 DENND1AQ8TEH3 1009 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 BIRC7Q96CA5 298 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 GAS2L1Q99501 681 aaPredicted RBP11.42□□□□□ -0.58
COL9A1-202ENST00000357250 PTPN18Q99952 460 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 OR51V1Q9H2C8 321 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 CERS4Q9HA82 394 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 ADAP2Q9NPF8 381 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 GKN1Q9NS71 199 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 MTMR11A4FU01 709 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 METTL21EPA6NDL7 271 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.42□□□□□ -0.58
COL9A1-202ENST00000357250 SLC31A1O15431 190 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 ZNF623O75123 536 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 ACRP10323 421 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 FGF3P11487 239 aaPredicted RBP11.42□□□□□ -0.58
COL9A1-202ENST00000357250 HRH2P25021 359 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 CCKBRP32239 447 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 GSTM4Q03013 218 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 OLIG2Q13516 323 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 COQ5Q5HYK3 327 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 TMIGD1Q6UXZ0 262 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 PRR23CQ6ZRP0 262 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 PEBP4Q96S96 227 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 PKP2Q99959 881 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 DCSTAMPQ9H295 470 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 SLC2A6Q9UGQ3 507 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 MGAT4BQ9UQ53 548 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 MEMO1Q9Y316 297 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 PCDHGA2Q9Y5H1 932 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 AKAP11Q9UKA4 1901 aa11.42□□□□□ -0.58
COL9A1-202ENST00000357250 WRBO00258 174 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 TP73O15350 636 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 ABCB7O75027 752 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 HPRP00739 348 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 NRG3P56975 720 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 MEDAGQ5VYS4 303 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 LIPJQ5W064 366 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 C15orf39Q6ZRI6 1047 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 AUTS2Q8WXX7 1259 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 LRCH3Q96II8 777 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 ERMAPQ96PL5 475 aaPredicted RBP11.41□□□□□ -0.58
COL9A1-202ENST00000357250 CST11Q9H112 138 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 SERINC1Q9NRX5 453 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 SNTG1Q9NSN8 517 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 CHD4Q14839 1912 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 TTC24A2A3L6 582 aaPredicted RBP11.41□□□□□ -0.58
COL9A1-202ENST00000357250 POP7O75817 140 aaKnown RBP11.41□□□□□ -0.58
COL9A1-202ENST00000357250 MPC1LP0DKB6 136 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 GSCP56915 257 aaPredicted RBP11.41□□□□□ -0.58
COL9A1-202ENST00000357250 TAS2R50P59544 299 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 MOGQ16653 247 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 PTCHD3Q3KNS1 767 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 PHTF2Q8N3S3 785 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 CHST4Q8NCG5 386 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 SLC5A11Q8WWX8 675 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 ING5Q8WYH8 240 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 IMP4Q96G21 291 aaKnown RBP11.41□□□□□ -0.58
COL9A1-202ENST00000357250 CDK15Q96Q40 435 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 KCNH6Q9H252 994 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 CRTAC1Q9NQ79 661 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 TDP1Q9NUW8 608 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 MAFFQ9ULX9 164 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 GMEB1Q9Y692 573 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 ALPIP09923 528 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 TFGQ92734 400 aaPredicted RBP11.41□□□□□ -0.58
COL9A1-202ENST00000357250 BTBD1Q9H0C5 482 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 TRIM36Q9NQ86 728 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 TNFRSF10DQ9UBN6 386 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 MED31Q9Y3C7 131 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 HCN4Q9Y3Q4 1203 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 PCDHB11Q9Y5F2 797 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 CITO14578 2027 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 RAB36O95755 333 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 TGFB1P01137 390 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 AZGP1P25311 298 aaKnown RBP11.41□□□□□ -0.58
COL9A1-202ENST00000357250 KCNQ1P51787 676 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 UFM1P61960 85 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 SNAP47Q5SQN1 464 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 KIAA1614Q5VZ46 1190 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 STEAP4Q687X5 459 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 ZNF776Q68DI1 518 aaPredicted RBP11.41□□□□□ -0.58
COL9A1-202ENST00000357250 SLC2A7Q6PXP3 512 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 HDAC2Q92769 488 aaKnown RBP11.41□□□□□ -0.58
COL9A1-202ENST00000357250 PYCR2Q96C36 320 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 SCGB3A2Q96PL1 93 aa11.41□□□□□ -0.58
COL9A1-202ENST00000357250 RPF2Q9H7B2 306 aaKnown RBP11.41□□□□□ -0.58
COL9A1-202ENST00000357250 LYARQ9NX58 379 aaKnown RBP11.41□□□□□ -0.58
COL9A1-202ENST00000357250 M0QX08 132 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms