RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 GTF2E2P29084 291 aaKnown RBP15.39■□□□□ 0.05
HMGA1-202ENST00000347617 GNPDA1P46926 289 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 HTR6P50406 440 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 HK3P52790 923 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 RPL38P63173 70 aaKnown RBP15.39■□□□□ 0.05
HMGA1-202ENST00000347617 UBE3AQ05086 875 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 NPRL3Q12980 569 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 GTF2H3Q13889 308 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 TAF1AQ15573 450 aaPredicted RBP15.39■□□□□ 0.05
HMGA1-202ENST00000347617 PTPRNQ16849 979 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 RFTN2Q52LD8 501 aaPredicted RBP15.39■□□□□ 0.05
HMGA1-202ENST00000347617 ALG1LQ6GMV1 187 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 ZNF783Q6ZMS7 281 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 MILR1Q7Z6M3 343 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 TMEM150AQ86TG1 271 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 RAB43Q86YS6 212 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 PNPLA1Q8N8W4 532 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 OR4F6Q8NGB9 312 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 OR52B6Q8NGF0 335 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 CHTF18Q8WVB6 975 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 PYCR2Q96C36 320 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 LINGO1Q96FE5 620 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 OR52E6Q96RD3 313 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 REXO4Q9GZR2 422 aaKnown RBP15.39■□□□□ 0.05
HMGA1-202ENST00000347617 RNF38Q9H0F5 515 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 IKZF5Q9H5V7 419 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 IL21Q9HBE4 155 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 VNN3Q9NY84 501 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 KIAA1671Q9BY89 1806 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 TGM5O43548 720 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 PRAMEF11O60813 436 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 SEMG1P04279 462 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 HOXA9P31269 272 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 HNF4AP41235 474 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 LIMK1P53667 647 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 ITGA1P56199 1179 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 GPR50Q13585 617 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 CARTPTQ16568 116 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 CARD16Q5EG05 197 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 TRIM46Q7Z4K8 759 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 VN1R5Q7Z5H4 357 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 SERPINA11Q86U17 422 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 KRT73Q86Y46 540 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 GALNT12Q8IXK2 581 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 STK40Q8N2I9 435 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 KLHL5Q96PQ7 755 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 SEMA3CQ99985 751 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 REEP1Q9H902 201 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 PDP1Q9P0J1 537 aaPredicted RBP15.39■□□□□ 0.05
HMGA1-202ENST00000347617 TRPS1Q9UHF7 1281 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 ARIH1Q9Y4X5 557 aaPredicted RBP15.39■□□□□ 0.05
HMGA1-202ENST00000347617 U3KQV3 271 aa15.39■□□□□ 0.05
HMGA1-202ENST00000347617 H3BNC9 293 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 OR7A17O14581 309 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 C9P02748 559 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 KLKB1P03952 638 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 YES1P07947 543 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 CYP4B1P13584 511 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 PRKCAP17252 672 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 CD72P21854 359 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 PTX3P26022 381 aaPredicted RBP15.38■□□□□ 0.05
HMGA1-202ENST00000347617 SLC6A4P31645 630 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 ARL1P40616 181 aaPredicted RBP15.38■□□□□ 0.05
HMGA1-202ENST00000347617 RPP38P78345 283 aaKnown RBP15.38■□□□□ 0.05
HMGA1-202ENST00000347617 IL1RL1Q01638 556 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 ZNF235Q14590 738 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 ABRAXAS2Q15018 415 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 SPANXN4Q5MJ08 99 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 SYCE2Q6PIF2 218 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 ZNF517Q6ZMY9 492 aaPredicted RBP15.38■□□□□ 0.05
HMGA1-202ENST00000347617 ZNF367Q7RTV3 350 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 DEPDC4Q8N2C3 294 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 PGBD5Q8N414 524 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 AUTS2Q8WXX7 1259 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 CEP19Q96LK0 163 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 RIPOR3Q96MK2 946 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 EPYCQ99645 322 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 SLC29A3Q9BZD2 475 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 MTIF3Q9H2K0 278 aaKnown RBP15.38■□□□□ 0.05
HMGA1-202ENST00000347617 DYRK4Q9NR20 520 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 MAU2Q9Y6X3 613 aa15.38■□□□□ 0.05
HMGA1-202ENST00000347617 CHD5Q8TDI0 1954 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 ANAPC1Q9H1A4 1944 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 C2orf81A6NN90 581 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 CLCA1A8K7I4 914 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 SLITRK5O94991 958 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 GLUD1P00367 558 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 ESR1P03372 595 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 PRPS2P11908 318 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 HOXB9P17482 250 aaPredicted RBP15.37■□□□□ 0.05
HMGA1-202ENST00000347617 CORO1AP31146 461 aaKnown RBP15.37■□□□□ 0.05
HMGA1-202ENST00000347617 CSTF3Q12996 717 aaKnown RBP15.37■□□□□ 0.05
HMGA1-202ENST00000347617 IHHQ14623 411 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 SYT16Q17RD7 645 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 CEP68Q76N32 757 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 ZSWIM9Q86XI8 627 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 DENND1CQ8IV53 801 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 LIX1Q8N485 282 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 CPA6Q8N4T0 437 aa15.37■□□□□ 0.05
HMGA1-202ENST00000347617 CELF2-AS1Q8N7Q2 184 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms