RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 RPS13P62277 151 aaKnown RBP10.55□□□□□ -0.72
ECM1-201ENST00000346569 REEP5Q00765 189 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 CSTF1Q05048 431 aaKnown RBP10.55□□□□□ -0.72
ECM1-201ENST00000346569 CUL3Q13618 768 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 RCAN2Q14206 197 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 GPR18Q14330 331 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 ELOCQ15369 112 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 TLR1Q15399 786 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 DNAL1Q4LDG9 190 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 PMS2CLQ68D20 193 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 ZNF425Q6IV72 752 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 NOXRED1Q6NXP6 359 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 RETREG3Q86VR2 466 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 DSELQ8IZU8 1212 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 ANKRD53Q8N9V6 530 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 KYQ8NBH2 561 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 OR2L3Q8NG85 312 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 ZDHHC1Q8WTX9 485 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 JPH3Q8WXH2 748 aaPredicted RBP10.55□□□□□ -0.72
ECM1-201ENST00000346569 RCN3Q96D15 328 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 TMEM74Q96NL1 305 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 NPAS2Q99743 824 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 AIF1LQ9BQI0 150 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 ERVMER34-1Q9H9K5 563 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 DMRT3Q9NQL9 472 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 SPASTQ9UBP0 616 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 BAIAP2L1Q9UHR4 511 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 NDUFAF1Q9Y375 327 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 HCN4Q9Y3Q4 1203 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 POLR3HQ9Y535 204 aaPredicted RBP10.55□□□□□ -0.72
ECM1-201ENST00000346569 CEP192Q8TEP8 1941 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 FANCMQ8IYD8 2048 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 A0A088AWK7 358 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 A0A1W2PP18 115 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 DYTNA2CJ06 578 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 FAM221BA6H8Z2 402 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 LMO7DNF2Z398 122 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 TNFSF14O43557 240 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 TGFB1P01137 390 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 TACR1P25103 407 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 PTX3P26022 381 aaPredicted RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 PGM1P36871 562 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 AFF3P51826 1226 aaKnown RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 RAP1GDS1P52306 607 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 POLR2JP52435 117 aaKnown RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 CLDN8P56748 225 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 RAE1P78406 368 aaKnown RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 ELF3P78545 371 aaPredicted RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 BNC1Q01954 994 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 DDX39BQ13838 428 aaKnown RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 KIR2DS3Q14952 304 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 SF1Q15637 639 aaKnown RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 PLK5Q496M5 336 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 VPS26BQ4G0F5 336 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 GLIPR1L2Q4G1C9 344 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 COQ5Q5HYK3 327 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 DEPDC1Q5TB30 811 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 CACHD1Q5VU97 1274 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 KIAA1614Q5VZ46 1190 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 C8orf82Q6P1X6 216 aaPredicted RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 GALNT18Q6P9A2 607 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 HACD2Q6Y1H2 254 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 TMEM26Q6ZUK4 368 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 ARMCX6Q7L4S7 300 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 BMP8AQ7Z5Y6 402 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 SLC9B2Q86UD5 537 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 C11orf74Q86VG3 221 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 GKN2Q86XP6 184 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 RIMKLAQ8IXN7 391 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 RBM12BQ8IXT5 1001 aaKnown RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 LIX1Q8N485 282 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 FBXL6Q8N531 539 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 TMEM105Q8N8V8 129 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 LMX1AQ8TE12 382 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 NUDT8Q8WV74 236 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 GAB3Q8WWW8 586 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 SLC22A18Q96BI1 424 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 SPDL1Q96EA4 605 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 SLC45A3Q96JT2 553 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 APOLD1Q96LR9 279 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 RAB3IPQ96QF0 476 aaPredicted RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 OR2A14Q96R47 310 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 MRPL1Q9BYD6 325 aaKnown RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 SRMSQ9H3Y6 488 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 SLC6A20Q9NP91 592 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 MRPS30Q9NP92 439 aaKnown RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 NMRK1Q9NWW6 199 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 FBXO4Q9UKT5 387 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 RUVBL1Q9Y265 456 aaKnown RBP10.54□□□□□ -0.72
ECM1-201ENST00000346569 KLK4Q9Y5K2 254 aa10.54□□□□□ -0.72
ECM1-201ENST00000346569 A0A1B0GTW7 788 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 A0A1B0GVT2 93 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 TRBC2A0A5B9 178 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 FEZF1A0PJY2 475 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 ASPDHA6ND91 283 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 BBIP1A8MTZ0 92 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 ISM1B1AKI9 464 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 C9JVG2 144 aa10.53□□□□□ -0.72
ECM1-201ENST00000346569 PPM1DO15297 605 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms