RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 SSX6Q7RTT6 188 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 RD3Q7Z3Z2 195 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 C17orf64Q86WR6 236 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 PQLC3Q8N755 202 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 ZSCAN1Q8NBB4 408 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 COQ10AQ96MF6 247 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 GON7Q9BXV9 100 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
COL12A1-202ENST00000345356 NMUR1Q9HB89 426 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 COPZ2Q9P299 210 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 PCDHGC4Q9Y5F7 938 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 MROH2AA6NES4 1674 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 KAT6AQ92794 2004 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 MEIOCA2RUB1 952 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 TNFRSF10AO00220 468 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 ARL6IP5O75915 188 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 FUCA1P04066 466 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 HMGN1P05114 100 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 FCER2P06734 321 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 CASP3P42574 277 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 TAF1CQ15572 869 aaPredicted RBP11.78□□□□□ -0.52
COL12A1-202ENST00000345356 POM121L1PQ3SYA9 428 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 CYBRD1Q53TN4 286 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 ATAT1Q5SQI0 421 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 DNASE1L2Q92874 299 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 BTN2A3PQ96KV6 586 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 KXD1Q9BQD3 176 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 MTG2Q9H4K7 406 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 TMEM185BQ9H7F4 350 aa11.78□□□□□ -0.52
COL12A1-202ENST00000345356 CCL15-CCL14A0A0B4J2E2 113 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 C9IYK1 514 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 RFPL3O75679 317 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 CNTN5O94779 1100 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 VAMP1P23763 118 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 DCKP27707 260 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 CCL15Q16663 113 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 SOWAHAQ2M3V2 549 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 FAM214AQ32MH5 1076 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 ATAD3CQ5T2N8 411 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 KANK2Q63ZY3 851 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 RAET1GQ6H3X3 334 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 FAM198BQ6UWH4 519 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 ARSKQ6UWY0 536 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 MON1AQ86VX9 555 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 ZSWIM9Q86XI8 627 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 OR2L3Q8NG85 312 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 OR5AK3PQ8NH89 298 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 PSMG2Q969U7 264 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 PMEPA1Q969W9 287 aa11.77□□□□□ -0.52
COL12A1-202ENST00000345356 C13orf42A0A1B0GVH6 325 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 NRP1O14786 923 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 SLC25A12O75746 678 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 HSD17B1P14061 328 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 RPL9P32969 192 aaKnown RBP11.77□□□□□ -0.53
COL12A1-202ENST00000345356 ARF3P61204 181 aaPredicted RBP11.77□□□□□ -0.53
COL12A1-202ENST00000345356 ARF1P84077 181 aaKnown RBP11.77□□□□□ -0.53
COL12A1-202ENST00000345356 MC1RQ01726 317 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 NPRL3Q12980 569 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 NOMO2Q5JPE7 1267 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 BCL2L15Q5TBC7 163 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 AGAP7PQ5VUJ5 663 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 GALNT7Q86SF2 657 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 ATCAYQ86WG3 371 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 C2orf73Q8N5S3 287 aaPredicted RBP11.77□□□□□ -0.53
COL12A1-202ENST00000345356 OR6Q1Q8NGQ2 317 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 NFKBIDQ8NI38 313 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 MAPK15Q8TD08 544 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 MED30Q96HR3 178 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 SIAEQ9HAT2 523 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 ZNF214Q9UL59 606 aaPredicted RBP11.77□□□□□ -0.53
COL12A1-202ENST00000345356 NME4O00746 187 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 PRAMEF12O95522 483 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 CH25HO95992 272 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 GSTM3P21266 225 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 RORAP35398 523 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 SPAM1P38567 509 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 KNDC1Q76NI1 1749 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 ADGRG2Q8IZP9 1017 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 NDC1Q9BTX1 674 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 KANSL3Q9P2N6 904 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 RHCGQ9UBD6 479 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 HSPE1-MOB4S4R3N1 261 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 SPATA31A1Q5TZJ5 1347 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 MCIDASD6RGH6 385 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 PCDH17O14917 1159 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 RB1P06400 928 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 RPS12P25398 132 aaKnown RBP11.77□□□□□ -0.53
COL12A1-202ENST00000345356 GPR1P46091 355 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 GSTM4Q03013 218 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 LRRC37A5PQ49AS3 106 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.77□□□□□ -0.53
COL12A1-202ENST00000345356 FOXRED2Q8IWF2 684 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 PEBP4Q96S96 227 aa11.77□□□□□ -0.53
COL12A1-202ENST00000345356 A0A1W2PRB8 838 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 GPR25O00155 361 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 HLA-DQB2P05538 268 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 RAB3BP20337 219 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 AGXTP21549 392 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 DSTNP60981 165 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 SF3B4Q15427 424 aaKnown RBP eCLIP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms