RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SHROOM2Q13796 1616 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ATRNO75882 1429 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 A0A0D9SG52 128 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 SLC16A8O95907 504 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 INHAP05111 366 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 GIMD1P0DJR0 217 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 PHKG2P15735 406 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ARHGAP1Q07960 439 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 VAMP3Q15836 100 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ATG9BQ674R7 924 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 RNF180Q86T96 592 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 R3HDM4Q96D70 268 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 RNF170Q96K19 258 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 HEXIM2Q96MH2 286 aaKnown RBP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 UNC93B1Q9H1C4 597 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 GSKIPQ9P0R6 139 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 USP18Q9UMW8 372 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 NOP16Q9Y3C1 178 aaKnown RBP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ADAM18Q9Y3Q7 739 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 CMAHPQ9Y471 501 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 SPTA1P02549 2419 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 NFASCO94856 1347 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 NAP1L6A6NFF2 107 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF587BE7ETH6 402 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF16P17020 682 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ITGA3P26006 1051 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ERVK-25P63136 954 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 LAPTM4AQ15012 233 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 BLOC1S3Q6QNY0 202 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 OR4K15Q8NH41 348 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 LRCH3Q96II8 777 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 MARK4Q96L34 752 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 KREMEN1Q96MU8 473 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ERVK-6Q9BXR3 956 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 SLC2A11Q9BYW1 496 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 LACRTQ9GZZ8 138 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 IPPKQ9H8X2 491 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ERVK-18Q9QC07 812 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 HACL1Q9UJ83 578 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ARVCFO00192 962 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 TLR5O60602 858 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 GALTP07902 379 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 RAB5AP20339 215 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 RTP2Q5QGT7 225 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 CYB5R2Q6BCY4 276 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 FAM220AQ7Z4H9 259 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 SLC22A16Q86VW1 577 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 MRPL41Q8IXM3 137 aaKnown RBP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 LRRC57Q8N9N7 239 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 TANKQ92844 425 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 EXTL1Q92935 676 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 CDK15Q96Q40 435 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 HSD3B7Q9H2F3 369 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 NELFAQ9H3P2 528 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ALG2Q9H553 416 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 TCFL5Q9UL49 500 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 KDELR3O43731 214 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 CLCN5P51795 746 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 PWP1Q13610 501 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 PRPF38BQ5VTL8 546 aaKnown RBP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ADGRD1Q6QNK2 874 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 SEPT12Q8IYM1 358 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 FLAD1Q8NFF5 587 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 OSBPL2Q9H1P3 480 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ACOXLQ9NUZ1 547 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 SLC22A20A6NK97 555 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 BPIFB3P59826 476 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 XKR5Q6UX68 686 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 PID1Q7Z2X4 250 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ADAT2Q7Z6V5 191 aaKnown RBP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 SLC44A3Q8N4M1 653 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 LRFN3Q9BTN0 628 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 THUMPD1Q9NXG2 353 aaKnown RBP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 MAGEB6P1A0A0J9YX57 407 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 MRASO14807 208 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 SDC3O75056 442 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ZMPSTE24O75844 475 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 MMP1P03956 469 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 OR4E1P0C645 316 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 PTNP21246 168 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ATP4BP51164 291 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 EPHX4Q8IUS5 362 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 NUDT16Q96DE0 195 aaKnown RBP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 COPRSQ9NQ92 184 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 TSR3Q9UJK0 312 aaKnown RBP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 DTX4Q9Y2E6 619 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 RPL36Q9Y3U8 105 aaKnown RBP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 FAM166BA8MTA8 275 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 MINDY4BA8MYZ0 360 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 NSA2O95478 260 aaKnown RBP3.67□□□□□ -1.82
SYNE2-202ENST00000344113 MT-CO2P00403 227 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 ERVK-8P63133 956 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 SYTL3Q4VX76 610 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 HSDL2Q6YN16 418 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 C3P1Q6ZMU1 363 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 RIT1Q92963 219 aa3.67□□□□□ -1.82
SYNE2-202ENST00000344113 DPH1Q9BZG8 443 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms