RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TXNRD2Q9NNW7 524 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 FZD4Q9ULV1 537 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 TLR4O00206 839 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 ANXA4P09525 319 aaPredicted RBP12.88□□□□□ -0.35
COL2A1-201ENST00000337299 PRSS56P0CW18 603 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 MAGEA2P43356 314 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 GMFBP60983 142 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 CLEC12AQ5QGZ9 265 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 KIAA1161Q6NSJ0 714 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 TAPT1Q6NXT6 567 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 UBE2R2Q712K3 238 aaPredicted RBP12.88□□□□□ -0.35
COL2A1-201ENST00000337299 DEFB128Q7Z7B8 93 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 SRFBP1Q8NEF9 429 aaKnown RBP12.88□□□□□ -0.35
COL2A1-201ENST00000337299 C12orf66Q96MD2 445 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 IGSF5Q9NSI5 407 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 NUDT4Q9NZJ9 180 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 UBQLN2Q9UHD9 624 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 POLHQ9Y253 713 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 GABARAPO95166 117 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 CD1DP15813 335 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 GALNT2Q10471 571 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 ARMC12Q5T9G4 340 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 BCL2L15Q5TBC7 163 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 GDPD3Q7L5L3 318 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 CLDN19Q8N6F1 224 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 OR7D4Q8NG98 312 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 XAGE5Q8WWM1 108 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 CCDC32Q9BV29 185 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 ABCG5Q9H222 651 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 ENAMQ9NRM1 1142 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 TAS2R7Q9NYW3 318 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 CD300AQ9UGN4 299 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 SLCO3A1Q9UIG8 710 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 NUP214P35658 2090 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-201ENST00000337299 CD68P34810 354 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-201ENST00000337299 NUP62P37198 522 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-201ENST00000337299 SOX3P41225 446 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 RPIAP49247 311 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 GP2P55259 537 aaKnown RBP12.87□□□□□ -0.35
COL2A1-201ENST00000337299 TATDN3Q17R31 274 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 ZNF362Q5T0B9 420 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-201ENST00000337299 LINGO4Q6UY18 593 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 CLEC20AQ6ZU45 233 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 NUDT8Q8WV74 236 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 FERD3LQ96RJ6 166 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 MFSD1Q9H3U5 465 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 COMMD9Q9P000 198 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 LOC730098B7Z3J9 87 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 HOXC11O43248 304 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-201ENST00000337299 NME6O75414 186 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-201ENST00000337299 UGT2B17O75795 530 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 DDCP20711 480 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 IL32P24001 234 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 TGFBR2P37173 567 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 MAGEA6P43360 314 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 LILRA4P59901 499 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 GCNT6Q5T4J0 391 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 XKRXQ6PP77 449 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 ARSKQ6UWY0 536 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 ZNF655Q8N720 491 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-201ENST00000337299 FAM86B1Q8N7N1 296 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 KIAA1191Q96A73 305 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 TMEM159Q96B96 161 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 MAP6Q96JE9 813 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 NEDD4LQ96PU5 975 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 SLC9A7Q96T83 725 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 SEC14L3Q9UDX4 400 aa12.87□□□□□ -0.35
COL2A1-201ENST00000337299 KIAA0100Q14667 2235 aaKnown RBP12.86□□□□□ -0.35
COL2A1-201ENST00000337299 LOC105369274A0A096LPK9 316 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 SLC28A2O43868 658 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 TSPAN1O60635 241 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 TP53P04637 393 aaPredicted RBP12.86□□□□□ -0.35
COL2A1-201ENST00000337299 AKR1A1P14550 325 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 HOXB6P17509 224 aaKnown RBP12.86□□□□□ -0.35
COL2A1-201ENST00000337299 GABRB3P28472 473 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 CHIT1Q13231 466 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 GALEQ14376 348 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 TSPYL5Q86VY4 417 aaPredicted RBP12.86□□□□□ -0.35
COL2A1-201ENST00000337299 ZFAND4Q86XD8 727 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 FAM20CQ8IXL6 584 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 OR4N4Q8N0Y3 316 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 POP5Q969H6 163 aaKnown RBP12.86□□□□□ -0.35
COL2A1-201ENST00000337299 NPY6RQ99463 290 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 TAS2R16Q9NYV7 291 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 AGO1Q9UL18 857 aaKnown RBP12.86□□□□□ -0.35
COL2A1-201ENST00000337299 POFUT2Q9Y2G5 429 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 RPL36Q9Y3U8 105 aaKnown RBP12.86□□□□□ -0.35
COL2A1-201ENST00000337299 B8ZZF3 427 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 GABRDO14764 452 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 ARHGEF15O94989 841 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 CH25HO95992 272 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 EDN1P05305 212 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 TCF3P15923 654 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 SPNP16150 400 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 NFKB2Q00653 900 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 DBPQ10586 325 aaPredicted RBP12.86□□□□□ -0.35
COL2A1-201ENST00000337299 SPHARQ15513 63 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 GPR68Q15743 365 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 RFTN2Q52LD8 501 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms