RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TFAP2AP05549 437 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 CHRM5P08912 532 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-201ENST00000334136 CDK4P11802 303 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 CD6P30203 668 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 GPC1P35052 558 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 P2RY2P41231 377 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 RPIAP49247 311 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 DGKQP52824 942 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 CDKL1Q00532 357 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 TXNDC11Q6PKC3 985 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 PLEKHM3Q6ZWE6 761 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 PIK3C3Q8NEB9 887 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 KBTBD8Q8NFY9 601 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 PIH1D2Q8WWB5 315 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 RAD51AP1Q96B01 352 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 VPS35Q96QK1 796 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 GPR22Q99680 433 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 SLC29A1Q99808 456 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 RBM4BQ9BQ04 359 aaKnown RBP11.45□□□□□ -0.58
HDAC6-201ENST00000334136 RBM4Q9BWF3 364 aaKnown RBP11.45□□□□□ -0.58
HDAC6-201ENST00000334136 SLC6A17Q9H1V8 727 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 KCNE2Q9Y6J6 123 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 AURKAO14965 403 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 ELK4P28324 431 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 CLCNKAP51800 687 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 PHKG1Q16816 387 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 TIMM50Q3ZCQ8 353 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 INTS11Q5TA45 600 aaKnown RBP11.44□□□□□ -0.58
HDAC6-201ENST00000334136 AFMIDQ63HM1 303 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 CASP12Q6UXS9 341 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 NCCRP1Q6ZVX7 275 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-201ENST00000334136 PLPP6Q8IY26 295 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 TMBIM1Q969X1 311 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 MUS81Q96NY9 551 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 GSDMCQ9BYG8 508 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 TRIT1Q9H3H1 467 aaKnown RBP11.44□□□□□ -0.58
HDAC6-201ENST00000334136 TOR4AQ9NXH8 423 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 TUBA8Q9NY65 449 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-201ENST00000334136 WBP11Q9Y2W2 641 aaKnown RBP11.44□□□□□ -0.58
HDAC6-201ENST00000334136 PMF1-BGLAPU3KQ54 211 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 H3BNH8 94 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 FBP2O00757 339 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 SLC22A2O15244 555 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 DENRO43583 198 aaKnown RBP11.44□□□□□ -0.58
HDAC6-201ENST00000334136 OTCP00480 354 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 LTBRP36941 435 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 SLC26A3P40879 764 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 BLVRAP53004 296 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 DAG1Q14118 895 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 RAB39AQ14964 217 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 LAPTM4AQ15012 233 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 RFX4Q33E94 735 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 FAM174BQ3ZCQ3 159 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 PSAPL1Q6NUJ1 521 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 UGT2A3Q6UWM9 527 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 HSD11B1LQ7Z5J1 315 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 OR52J3Q8NH60 311 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 PPP1R14BQ96C90 147 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 IL26Q9NPH9 171 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 ITM2CQ9NQX7 267 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 TRPC4Q9UBN4 977 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 SH3PXD2BA1X283 911 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 PRORSD1PA6NEY8 169 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 RHPN2P1A8MT19 583 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 IQCF5A8MTL0 148 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 MYL12BO14950 172 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 AIREO43918 545 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 MEP1AQ16819 746 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 ZFP69Q49AA0 526 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 C2orf73Q8N5S3 287 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-201ENST00000334136 AADATQ8N5Z0 425 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 IL17RCQ8NAC3 791 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 MDGA1Q8NFP4 955 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 BTN2A2Q8WVV5 523 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 HSPA12BQ96MM6 686 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 AARSD1Q9BTE6 412 aaKnown RBP11.44□□□□□ -0.58
HDAC6-201ENST00000334136 PDFQ9HBH1 243 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 MIEF1Q9NQG6 463 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 POLE4Q9NR33 117 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 SOHLH2Q9NX45 425 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 KLHL20Q9Y2M5 609 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 OR1A2Q9Y585 309 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 MYO10Q9HD67 2058 aa11.44□□□□□ -0.58
HDAC6-201ENST00000334136 SDHDO14521 159 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 EFEMP2O95967 443 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 UMPSP11172 480 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 MAGEA6P43360 314 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 SRP54P61011 504 aaKnown RBP11.43□□□□□ -0.58
HDAC6-201ENST00000334136 TUBA4AP68366 448 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 MYBPC1Q00872 1141 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 TMEM196Q5HYL7 178 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 ZNF648Q5T619 568 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-201ENST00000334136 C9orf64Q5T6V5 341 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 SPATA19Q7Z5L4 167 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 LMX1AQ8TE12 382 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 LCN9Q8WX39 176 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 RNFT2Q96EX2 444 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 MSLNLQ96KJ4 702 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 NCDNQ9UBB6 729 aa11.43□□□□□ -0.58
HDAC6-201ENST00000334136 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms