RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ZNF556Q9HAH1 456 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 EIF3KQ9UBQ5 218 aaKnown RBP11.52□□□□□ -0.57
LIMK2-202ENST00000333611 MLXQ9UH92 298 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 PCDHA9Q9Y5H5 950 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 PTCH2Q9Y6C5 1203 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 FABP12A6NFH5 140 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 AP2A2O94973 939 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 EPHA2P29317 976 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 GPC1P35052 558 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 PSMD8P48556 350 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 HSPA14Q0VDF9 509 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 TSTQ16762 297 aaKnown RBP11.52□□□□□ -0.57
LIMK2-202ENST00000333611 TRIM71Q2Q1W2 868 aaKnown RBP11.52□□□□□ -0.57
LIMK2-202ENST00000333611 GPRIN3Q6ZVF9 776 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 BHLHA9Q7RTU4 235 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 CYP4Z2PQ8N1L4 340 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 ANKRD53Q8N9V6 530 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 TTC29Q8NA56 475 aaPredicted RBP11.52□□□□□ -0.57
LIMK2-202ENST00000333611 OR4M1Q8NGD0 313 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 TOE1Q96GM8 510 aaKnown RBP11.52□□□□□ -0.57
LIMK2-202ENST00000333611 AP5M1Q9H0R1 490 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 C11orf54Q9H0W9 315 aaPredicted RBP11.52□□□□□ -0.57
LIMK2-202ENST00000333611 NINQ8N4C6 2090 aa11.52□□□□□ -0.57
LIMK2-202ENST00000333611 PABPN1LA6NDY0 278 aaKnown RBP11.51□□□□□ -0.57
LIMK2-202ENST00000333611 TRIM64A6NGJ6 449 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 TRIM64BA6NI03 449 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 H3BQ06 376 aaPredicted RBP11.51□□□□□ -0.57
LIMK2-202ENST00000333611 DNAJB5O75953 348 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 SLC22A5O76082 557 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 PAHP00439 452 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 IFNA14P01570 189 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 HRH2P25021 359 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 HMGCS1Q01581 520 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 CSTF3Q12996 717 aaKnown RBP11.51□□□□□ -0.57
LIMK2-202ENST00000333611 IRF5Q13568 498 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 FGL2Q14314 439 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 PARP15Q460N3 678 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 GTDC1Q4AE62 458 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 TMEM81Q6P7N7 255 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 KIAA1324Q6UXG2 1013 aaKnown RBP11.51□□□□□ -0.57
LIMK2-202ENST00000333611 GLT6D1Q7Z4J2 308 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 GPSM1Q86YR5 675 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 GPC2Q8N158 579 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 THEM5Q8N1Q8 247 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 OR2T12Q8NG77 320 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 LHFPL5Q8TAF8 219 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 IMP4Q96G21 291 aaKnown RBP11.51□□□□□ -0.57
LIMK2-202ENST00000333611 BTBD2Q9BX70 525 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 UGT2B28Q9BY64 529 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 TRIM54Q9BYV2 358 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 PPA2Q9H2U2 334 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 MFSD1Q9H3U5 465 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 RNF121Q9H920 327 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 PDP1Q9P0J1 537 aaPredicted RBP11.51□□□□□ -0.57
LIMK2-202ENST00000333611 RNF181Q9P0P0 153 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 TBC1D24Q9ULP9 559 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 GPR45Q9Y5Y3 372 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 ASPDHA6ND91 283 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 TRIM77I1YAP6 450 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 CAPN5O15484 640 aaPredicted RBP11.51□□□□□ -0.57
LIMK2-202ENST00000333611 TLR5O60602 858 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 NRIP1P48552 1158 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 CSRP3P50461 194 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 MGAT3Q09327 533 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 MAB21L1Q13394 359 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 AP5B1Q2VPB7 878 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 HACD2Q6Y1H2 254 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 LUZP2Q86TE4 346 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 ADHFE1Q8IWW8 467 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 AADATQ8N5Z0 425 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 IGSF8Q969P0 613 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 L3HYPDHQ96EM0 354 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 FOPNLQ96NB1 174 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 MBOAT4Q96T53 435 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 PCDHB16Q9NRJ7 776 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 ABCG2Q9UNQ0 655 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 GRIP1Q9Y3R0 1128 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 PCDHGC4Q9Y5F7 938 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 ALG5Q9Y673 324 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 TRAV6A0A075B6T7 132 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 LDB2O43679 373 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 STSP08842 583 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 GDF5P43026 501 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 TPMTP51580 245 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 SCRN3Q0VDG4 424 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 C6orf136Q5SQH8 315 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 KANK2Q63ZY3 851 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 ASB18Q6ZVZ8 466 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 TMPRSS9Q7Z410 1059 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 TMEM86AQ8N2M4 240 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 OR7D4Q8NG98 312 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 EEF1AKMT1Q8WVE0 214 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 ASB15Q8WXK1 588 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 SGTBQ96EQ0 304 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 REXO5Q96IC2 774 aaKnown RBP11.51□□□□□ -0.57
LIMK2-202ENST00000333611 ZYG11BQ9C0D3 744 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 CRISPLD1Q9H336 500 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 KRT84Q9NSB2 600 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 IMPAD1Q9NX62 359 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 COMMD3Q9UBI1 195 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms