RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 GDE1Q9NZC3 331 aa8.72□□□□□ -1.01
COPB2-201ENST00000333188 FADS3Q9Y5Q0 445 aa8.72□□□□□ -1.01
COPB2-201ENST00000333188 SPAG17Q6Q759 2223 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 ELOVL7A1L3X0 281 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 CLIC1O00299 241 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 CLOCKO15516 846 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 SGTAO43765 313 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 NUAK1O60285 661 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 RNGTTO60942 597 aaKnown RBP8.71□□□□□ -1.01
COPB2-201ENST00000333188 EPN2O95208 641 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 C1orf105O95561 183 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 ZBTB11O95625 1053 aaPredicted RBP8.71□□□□□ -1.01
COPB2-201ENST00000333188 POU1F1P28069 291 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 PPP2CBP62714 309 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 PPP2CAP67775 309 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 PHC1P78364 1004 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 ID2Q02363 134 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 MAD2L1Q13257 205 aaPredicted RBP8.71□□□□□ -1.01
COPB2-201ENST00000333188 NEDD8Q15843 81 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 AASDHQ4L235 1098 aaPredicted RBP8.71□□□□□ -1.01
COPB2-201ENST00000333188 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.71□□□□□ -1.01
COPB2-201ENST00000333188 ZFP1Q6P2D0 407 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 PNCKQ6P2M8 343 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 Q6ZS52 159 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 DDHD1Q8NEL9 900 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 LYSMD1Q96S90 227 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 MYCBPQ99417 103 aaPredicted RBP8.71□□□□□ -1.01
COPB2-201ENST00000333188 SLC17A9Q9BYT1 436 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 ABCG4Q9H172 646 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 ANKRA2Q9H9E1 313 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 C6orf203Q9P0P8 240 aaPredicted RBP8.71□□□□□ -1.01
COPB2-201ENST00000333188 CLCA2Q9UQC9 943 aa8.71□□□□□ -1.01
COPB2-201ENST00000333188 CKAP5Q14008 2032 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 C7orf72A4D263 438 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 B4GAT1O43505 415 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 KIF1CO43896 1103 aaKnown RBP8.71□□□□□ -1.02
COPB2-201ENST00000333188 PRAMEF10O60809 474 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 C6orf47O95873 294 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 CCT8P50990 548 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 AP1S2P56377 157 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 MRPS35P82673 323 aaKnown RBP8.71□□□□□ -1.02
COPB2-201ENST00000333188 SLC14A1Q13336 389 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 FAM98BQ52LJ0 330 aaKnown RBP8.71□□□□□ -1.02
COPB2-201ENST00000333188 XKR7Q5GH72 579 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 TMEM196Q5HYL7 178 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 TLDC1Q6P9B6 456 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 TMIGD1Q6UXZ0 262 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 WDR53Q7Z5U6 358 aaPredicted RBP8.71□□□□□ -1.02
COPB2-201ENST00000333188 TICAM1Q8IUC6 712 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 VPS37AQ8NEZ2 397 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 PDLIM5Q96HC4 596 aaKnown RBP8.71□□□□□ -1.02
COPB2-201ENST00000333188 DUSP26Q9BV47 211 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 AMBNQ9NP70 447 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 RHCGQ9UBD6 479 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 GULP1Q9UBP9 304 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 RAB23Q9ULC3 237 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 PPT2Q9UMR5 302 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 PCDHGA11Q9Y5H2 935 aa8.71□□□□□ -1.02
COPB2-201ENST00000333188 CACNA1CQ13936 2221 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 CFAP54Q96N23 3096 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 BBIP1A8MTZ0 92 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 CACNB4O00305 520 aaPredicted RBP8.7□□□□□ -1.02
COPB2-201ENST00000333188 CXCR6O00574 342 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 HOXC11O43248 304 aaPredicted RBP8.7□□□□□ -1.02
COPB2-201ENST00000333188 SNAP29O95721 258 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 CLPTM1O96005 669 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 ANXA6P08133 673 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 ACPPP15309 386 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 HOXA9P31269 272 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 DRD3P35462 400 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 PRLHRP49683 370 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 HNMTP50135 292 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 TAP2Q03519 686 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 PIGFQ07326 219 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 IRGCQ6NXR0 463 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 LRRC70Q7Z2Q7 622 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 NETO1Q8TDF5 533 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 GTF2H4Q92759 462 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 SLCO4A1Q96BD0 722 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 PHF12Q96QT6 1004 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 UBAP1Q9NZ09 502 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 ZIM2Q9NZV7 527 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 SUCOQ9UBS9 1254 aaKnown RBP8.7□□□□□ -1.02
COPB2-201ENST00000333188 A0A0J9YVX5 310 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 ALBP02768 609 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 CBSLP0DN79 551 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 CBSP35520 551 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 POLR2IP36954 125 aaKnown RBP8.7□□□□□ -1.02
COPB2-201ENST00000333188 SSR2P43308 183 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 PNLIPRP1P54315 467 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 PWP1Q13610 501 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 BLMHQ13867 455 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 COL13A1Q5TAT6 717 aaPredicted RBP8.7□□□□□ -1.02
COPB2-201ENST00000333188 ZNF551Q7Z340 670 aaPredicted RBP8.7□□□□□ -1.02
COPB2-201ENST00000333188 SLC5A11Q8WWX8 675 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 MRPL38Q96DV4 380 aaKnown RBP8.7□□□□□ -1.02
COPB2-201ENST00000333188 ARSGQ96EG1 525 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 ANKRD27Q96NW4 1050 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 TRAPPC9Q96Q05 1148 aa8.7□□□□□ -1.02
COPB2-201ENST00000333188 PHOX2BQ99453 314 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms