RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ADGRG6Q86SQ4 1221 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 RAB2BQ8WUD1 216 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 OMA1Q96E52 524 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 PKD1L3Q7Z443 1732 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 CCDC182A6NF36 153 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 IDH3BO43837 385 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 RXRGP48443 463 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 NCBP2P52298 156 aaKnown RBP eCLIP16■□□□□ 0.15
CLIP4-201ENST00000320081 IL18Q14116 193 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 NOXRED1Q6NXP6 359 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 HDDC2Q7Z4H3 204 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 CITED4Q96RK1 184 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 ZNF222Q9UK12 451 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 CENPXA8MT69 81 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 M0R129 80 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 GTF2E2P29084 291 aaKnown RBP16■□□□□ 0.15
CLIP4-201ENST00000320081 CDK6Q00534 326 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 TMEM115Q12893 351 aaPredicted RBP16■□□□□ 0.15
CLIP4-201ENST00000320081 BLOC1S3Q6QNY0 202 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 MDGA1Q8NFP4 955 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 C11orf24Q96F05 449 aaPredicted RBP16■□□□□ 0.15
CLIP4-201ENST00000320081 DCSTAMPQ9H295 470 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 C3orf14Q9HBI5 128 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 Q9Y3F1 56 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 NINQ8N4C6 2090 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 PI15O43692 258 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 ALOX5P09917 674 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 BPIP17213 487 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 VIPR2P41587 438 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 PGDP52209 483 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 RGS1Q08116 209 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 SEMA3AQ14563 771 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 TEFMQ96QE5 360 aaKnown RBP15.99■□□□□ 0.15
CLIP4-201ENST00000320081 C17orf62Q9BQA9 187 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 HCFC1R1Q9NWW0 138 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 PPIEQ9UNP9 301 aaKnown RBP15.99■□□□□ 0.15
CLIP4-201ENST00000320081 SPIN1Q9Y657 262 aaPredicted RBP15.99■□□□□ 0.15
CLIP4-201ENST00000320081 CTSOP43234 321 aaPredicted RBP15.99■□□□□ 0.15
CLIP4-201ENST00000320081 ALDH3A2P51648 485 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 RAB39AQ14964 217 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 CTC1Q2NKJ3 1217 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 PRAMEF14Q5SWL7 426 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 PRAMEF13Q5VWM6 474 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 PLET1Q6UQ28 207 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 ISOC1Q96CN7 298 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 SPATA5L1Q9BVQ7 753 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 RBCK1Q9BYM8 510 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 MEAF6Q9HAF1 191 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 CCM2LQ9NUG4 571 aaPredicted RBP15.99■□□□□ 0.15
CLIP4-201ENST00000320081 NME7Q9Y5B8 376 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 PCDHB3Q9Y5E6 796 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 CROCCQ5TZA2 2017 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 ADAMTSL3P82987 1691 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 TTC34A8MYJ7 566 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 NFATC1O95644 943 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 LRRC32Q14392 662 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 CYS1Q717R9 158 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 ERI1Q8IV48 349 aaKnown RBP15.99■□□□□ 0.15
CLIP4-201ENST00000320081 PYURFQ96I23 114 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 RNF38Q9H0F5 515 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 LMAN2LQ9H0V9 348 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 AIG1Q9NVV5 245 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 CRNNQ9UBG3 495 aaPredicted RBP15.99■□□□□ 0.15
CLIP4-201ENST00000320081 STON1Q9Y6Q2 735 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 A8MV72 311 aaPredicted RBP15.99■□□□□ 0.15
CLIP4-201ENST00000320081 PDE9AO76083 593 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 CKMT1AP12532 417 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 RAB14P61106 215 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 CREMQ03060 361 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 ZNF33AQ06730 810 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 ZNHIT3Q15649 155 aaPredicted RBP15.99■□□□□ 0.15
CLIP4-201ENST00000320081 TMIGD1Q6UXZ0 262 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 HM13Q8TCT9 377 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 ITFG2Q969R8 447 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 ZFP3Q96NJ6 502 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 MUC13Q9H3R2 512 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 CD320Q9NPF0 282 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 IL26Q9NPH9 171 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 VAPAQ9P0L0 249 aa15.99■□□□□ 0.15
CLIP4-201ENST00000320081 GTPBP1O00178 669 aaKnown RBP15.98■□□□□ 0.15
CLIP4-201ENST00000320081 FDXRP22570 491 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 TNFAIP8L3Q5GJ75 292 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 TPGS2Q68CL5 300 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 KDELC1Q6UW63 502 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 TMEM173Q86WV6 379 aaPredicted RBP15.98■□□□□ 0.15
CLIP4-201ENST00000320081 AQP11Q8NBQ7 271 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 OR10H4Q8NGA5 316 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 OR4E2Q8NGC2 313 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 ZFAND2BQ8WV99 257 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 NUS1Q96E22 293 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 ZNF382Q96SR6 550 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 IKZF2Q9UKS7 526 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 PCDHGB3Q9Y5G1 929 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 COL4A1P02462 1669 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 BOLA2-SMG1P6H3BVE0 249 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 PDPK1O15530 556 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 TLX2O43763 284 aaPredicted RBP15.98■□□□□ 0.15
CLIP4-201ENST00000320081 ITGA1P56199 1179 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 SLC35F1Q5T1Q4 408 aa15.98■□□□□ 0.15
CLIP4-201ENST00000320081 RFLNAQ6ZTI6 216 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms