RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 EPN2O95208 641 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 SOD1P00441 154 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 JUNDP17535 347 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 KDELR2P33947 212 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 DAPP51397 102 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 PLA2G16P53816 162 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 RAD23AP54725 363 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 ERVFC1P60507 584 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 LIPIQ6XZB0 460 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 NRSN1Q8IZ57 195 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 CLECL1Q8IZS7 167 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 LILRA3Q8N6C8 439 aaPredicted RBP13.32□□□□□ -0.28
ATG4C-201ENST00000317868 OTUB2Q96DC9 234 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 CCM2Q9BSQ5 444 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 BLOC1S6Q9UL45 172 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 HIDE1A8MVS5 230 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 LAMP1P11279 417 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 POLR2EP19388 210 aaKnown RBP13.32□□□□□ -0.28
ATG4C-201ENST00000317868 RECQLP46063 649 aaPredicted RBP13.32□□□□□ -0.28
ATG4C-201ENST00000317868 VLDLRP98155 873 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 CDK5R2Q13319 367 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 GALNT18Q6P9A2 607 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 SLC16A12Q6ZSM3 486 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.32□□□□□ -0.28
ATG4C-201ENST00000317868 FNDC8Q8TC99 324 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 CYB5D2Q8WUJ1 264 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 LZICQ8WZA0 190 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 FOXJ1Q92949 421 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 PKP4Q99569 1192 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 RPS6KA6Q9UK32 745 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 MAPRE3Q9UPY8 281 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 EXO1Q9UQ84 846 aaKnown RBP13.32□□□□□ -0.28
ATG4C-201ENST00000317868 C2orf16Q68DN1 1984 aa13.32□□□□□ -0.28
ATG4C-201ENST00000317868 ATG13O75143 517 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 SRPRAP08240 638 aaKnown RBP13.31□□□□□ -0.28
ATG4C-201ENST00000317868 CISD3P0C7P0 127 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 COX7A2P14406 83 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 HOXA9P31269 272 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 BDKRB1P46663 353 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 CLK3P49761 638 aaKnown RBP13.31□□□□□ -0.28
ATG4C-201ENST00000317868 ITGA1P56199 1179 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 SPIDRQ14159 915 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 BCL7AQ4VC05 210 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 ADNP2Q6IQ32 1131 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 KLHL35Q6PF15 583 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 OR10Q1Q8NGQ4 319 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 SORCS1Q8WY21 1168 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 COQ10AQ96MF6 247 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 SH3PXD2BA1X283 911 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 BCKDKO14874 412 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 KIAA0355O15063 1070 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 JRKO75564 520 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 SLC16A8O95907 504 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 RHOP08100 348 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 PTPN2P17706 415 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 CCNA2P20248 432 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 FPR1P21462 350 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 IDSP22304 550 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 IGFBP5P24593 272 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 MAP4P27816 1152 aaKnown RBP13.31□□□□□ -0.28
ATG4C-201ENST00000317868 CA8P35219 290 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 ASMTP46597 345 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 CXCR4P61073 352 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 RAPSNQ13702 412 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 LRRC26Q2I0M4 334 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 SPIN4Q56A73 249 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 LAIR1Q6GTX8 287 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 ZCCHC8Q6NZY4 707 aaKnown RBP13.31□□□□□ -0.28
ATG4C-201ENST00000317868 SLCO4C1Q6ZQN7 724 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 GOT1L1Q8NHS2 421 aaPredicted RBP13.31□□□□□ -0.28
ATG4C-201ENST00000317868 ZFP90Q8TF47 636 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 CXorf40BQ96DE9 158 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 MTERF1Q99551 399 aaKnown RBP13.31□□□□□ -0.28
ATG4C-201ENST00000317868 DUSP26Q9BV47 211 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 ADNPQ9H2P0 1102 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 PREBQ9HCU5 417 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 HCFC2Q9Y5Z7 792 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 U3KQV3 271 aa13.31□□□□□ -0.28
ATG4C-201ENST00000317868 GABRR3A8MPY1 467 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 MITFO75030 526 aaPredicted RBP13.3□□□□□ -0.28
ATG4C-201ENST00000317868 UGT2B11O75310 529 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 E2F6O75461 281 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 CATP04040 527 aaKnown RBP13.3□□□□□ -0.28
ATG4C-201ENST00000317868 FABP3P05413 133 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 EEF1B2P24534 225 aaKnown RBP13.3□□□□□ -0.28
ATG4C-201ENST00000317868 DNAJA1P31689 397 aaKnown RBP13.3□□□□□ -0.28
ATG4C-201ENST00000317868 PREPP48147 710 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 TMEM115Q12893 351 aaPredicted RBP13.3□□□□□ -0.28
ATG4C-201ENST00000317868 NAE1Q13564 534 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 C16orf72Q14CZ0 275 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 ZNF284Q2VY69 593 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 FAHD1Q6P587 224 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 PARS2Q7L3T8 475 aaKnown RBP13.3□□□□□ -0.28
ATG4C-201ENST00000317868 LRRC56Q8IYG6 542 aaPredicted RBP13.3□□□□□ -0.28
ATG4C-201ENST00000317868 OR7G3Q8NG95 312 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 TMEM159Q96B96 161 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 C7orf34Q96L11 122 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 TCF25Q9BQ70 676 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 TPT1P8Q9HAU6 139 aa13.3□□□□□ -0.28
ATG4C-201ENST00000317868 RFPL2O75678 378 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms