RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ZSWIM9Q86XI8 627 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 PROX1Q92786 737 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 GGHQ92820 318 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 HOXD1Q9GZZ0 328 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 TMEM161AQ9NX61 479 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 IFT52Q9Y366 437 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 PCDHB11Q9Y5F2 797 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 NUP214P35658 2090 aaPredicted RBP18.48■□□□□ 0.55
RTN4-201ENST00000317610 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.48■□□□□ 0.55
RTN4-201ENST00000317610 CLCA1A8K7I4 914 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 TMEM229AB2RXF0 380 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 TBL1XO60907 577 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 VIPP01282 170 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 RPLP0P05388 317 aaKnown RBP18.48■□□□□ 0.55
RTN4-201ENST00000317610 C8GP07360 202 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 IRF1P10914 325 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 HNMTP50135 292 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 PTPN5P54829 565 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 GPR153Q6NV75 609 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 TPGS1Q6ZTW0 290 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 ANKS3Q6ZW76 656 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 SYT12Q8IV01 421 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 KBTBD8Q8NFY9 601 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 OR6K2Q8NGY2 324 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 MAGEB10Q96LZ2 347 aaPredicted RBP18.48■□□□□ 0.55
RTN4-201ENST00000317610 EBPLQ9BY08 206 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 TM6SF2Q9BZW4 377 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 C6orf62Q9GZU0 229 aaPredicted RBP18.48■□□□□ 0.55
RTN4-201ENST00000317610 K7ERQ8 282 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 COL6A1P12109 1028 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 SPNP16150 400 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 CCR7P32248 378 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 GRK5P34947 590 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 SLC11A1P49279 550 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 BCL2L1Q07817 233 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 PTCHD3Q3KNS1 767 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 TSEN54Q7Z6J9 526 aaKnown RBP18.47■□□□□ 0.55
RTN4-201ENST00000317610 PARP16Q8N5Y8 322 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 ZNF513Q8N8E2 541 aaPredicted RBP18.47■□□□□ 0.55
RTN4-201ENST00000317610 DCAF4L2Q8NA75 395 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 FAM83FQ8NEG4 500 aaPredicted RBP18.47■□□□□ 0.55
RTN4-201ENST00000317610 KCNC2Q96PR1 638 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 RNF38Q9H0F5 515 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 ZDHHC3Q9NYG2 299 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 SPASTQ9UBP0 616 aa18.47■□□□□ 0.55
RTN4-201ENST00000317610 HAT1O14929 419 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 YY2O15391 372 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 SOCS5O75159 536 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 DLGAP3O95886 979 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 DBTP11182 482 aaKnown RBP18.46■□□□□ 0.55
RTN4-201ENST00000317610 HMGA1P17096 107 aaKnown RBP18.46■□□□□ 0.55
RTN4-201ENST00000317610 CSKP41240 450 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 SEPHS1P49903 392 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 ZNF33BQ06732 778 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 Q6ZPB1 254 aaPredicted RBP18.46■□□□□ 0.55
RTN4-201ENST00000317610 CCDC103Q8IW40 242 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 CLECL1Q8IZS7 167 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 ZNF675Q8TD23 568 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 TPD52L3Q96J77 140 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 YME1L1Q96TA2 773 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 YIPF2Q9BWQ6 316 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 TPT1P8Q9HAU6 139 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 CELF2O95319 508 aaKnown RBP18.46■□□□□ 0.55
RTN4-201ENST00000317610 COX7A2P14406 83 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 JUPP14923 745 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 S100A1P23297 94 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 RRM2P31350 389 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 ETV6P41212 452 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 ELAVL2Q12926 359 aaKnown RBP18.46■□□□□ 0.55
RTN4-201ENST00000317610 CSTF3Q12996 717 aaKnown RBP18.46■□□□□ 0.55
RTN4-201ENST00000317610 ASB11Q8WXH4 323 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 MOV10Q9HCE1 1003 aaKnown RBP18.46■□□□□ 0.55
RTN4-201ENST00000317610 ADPRHL2Q9NX46 363 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 LYVE1Q9Y5Y7 322 aa18.46■□□□□ 0.55
RTN4-201ENST00000317610 SUV39H1O43463 412 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 DYRK3O43781 588 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 SNX4O95219 450 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 CPSF4O95639 269 aaKnown RBP18.45■□□□□ 0.54
RTN4-201ENST00000317610 GABRB1P18505 474 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 CST5P28325 142 aaPredicted RBP18.45■□□□□ 0.54
RTN4-201ENST00000317610 CSNK1DP48730 415 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 B4GALNT1Q00973 533 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 IRF3Q14653 427 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 HKDC1Q2TB90 917 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 GPR26Q8NDV2 337 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 COL21A1Q96P44 957 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 LYSMD1Q96S90 227 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 CLSTN3Q9BQT9 956 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 DOHHQ9BU89 302 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 ABCG8Q9H221 673 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 DNAJC11Q9NVH1 559 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 RBMX2Q9Y388 322 aaKnown RBP18.45■□□□□ 0.54
RTN4-201ENST00000317610 PCDHGA2Q9Y5H1 932 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 C1orf226A1L170 272 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 ADAM12O43184 909 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 ASNA1O43681 348 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 ABCB1P08183 1280 aaPredicted RBP18.45■□□□□ 0.54
RTN4-201ENST00000317610 ADORA3P0DMS8 318 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 S100A5P33763 92 aa18.45■□□□□ 0.54
RTN4-201ENST00000317610 PCGF2P35227 344 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms