RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 AIFM2Q9BRQ8 373 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 CD244Q9BZW8 370 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 PCDHGA6Q9Y5G7 932 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 H3BQ06 376 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 J3KR12 359 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 hCG_2039718K7EN88 272 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SCN2BO60939 215 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SCG5P05408 212 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 HAPLN1P10915 354 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 CKMT1AP12532 417 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 HSD3B1P14060 373 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 HSD3B2P26439 372 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 MC4RP32245 332 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 HTR2BP41595 481 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SLC9A3P48764 834 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 PPIGQ13427 754 aaKnown RBP eCLIP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 KLHL12Q53G59 568 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 CADM2Q8N3J6 435 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ESAMQ96AP7 390 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 TSSK3Q96PN8 268 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 TBC1D24Q9ULP9 559 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 TMCC3Q9ULS5 477 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 RUVBL1Q9Y265 456 aaKnown RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 PCDHGB7Q9Y5F8 929 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 E9PQ18 207 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 MYL12BO14950 172 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 NIPSNAP2O75323 286 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 MMP2P08253 660 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 CRISP1P54107 249 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 DSC3Q14574 896 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 MZT2AQ6P582 158 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SLC30A8Q8IWU4 369 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SIDT2Q8NBJ9 832 aaKnown RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 FAM83FQ8NEG4 500 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 CXorf40BQ96DE9 158 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 MSLNLQ96KJ4 702 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 CITED4Q96RK1 184 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 CENPOQ9BU64 300 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 MED18Q9BUE0 208 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SARS2Q9NP81 518 aaKnown RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SERHLQ9NQF3 203 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ITM2CQ9NQX7 267 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 NDFIP2Q9NV92 336 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 VNN3Q9NY84 501 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 NUFIP1Q9UHK0 495 aaKnown RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 BTNL2Q9UIR0 455 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ZMYM5Q9UJ78 669 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 VPS4AQ9UN37 437 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 PCDHGA2Q9Y5H1 932 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 OR6C70A6NIJ9 312 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 TSPAN9O75954 239 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 F2P00734 622 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 OR1E1P30953 314 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 RFX2P48378 723 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 HMGCS1Q01581 520 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SPHARQ15513 63 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 FAM122CQ6P4D5 195 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 LUZP2Q86TE4 346 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 GRAMD2AQ8IUY3 354 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SYT12Q8IV01 421 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SLC5A8Q8N695 610 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 LRRC17Q8N6Y2 441 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 FBXO22Q8NEZ5 403 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 DEDD2Q8WXF8 326 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 C7orf34Q96L11 122 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 TNFRSF10DQ9UBN6 386 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 FZD1Q9UP38 647 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 A0A0G2JLL6 359 aaPredicted RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SERTM1A2A2V5 107 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 B4DXG7 233 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF197O14709 1029 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF780AO75290 641 aaPredicted RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SERPINI2O75830 405 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 DHFRP00374 187 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 COL6A1P12109 1028 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SPNP16150 400 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 HMGCLP35914 325 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 HSPA7P48741 367 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 LIMK1P53667 647 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 AP1S2P56377 157 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 RAB14P61106 215 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 BTG1P62324 171 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PPP3R1P63098 170 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TSTQ16762 297 aaKnown RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 HSD17B12Q53GQ0 312 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 DALRD3Q5D0E6 543 aaKnown RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 MS4A13Q5J8X5 152 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ANKRD34AQ69YU3 496 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 OR4F3Q6IEY1 312 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TAPT1Q6NXT6 567 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF621Q6ZSS3 439 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CCDC149Q6ZUS6 474 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PRRT2Q7Z6L0 340 aaPredicted RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SCD5Q86SK9 330 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 DCBLD1Q8N8Z6 715 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 UBASH3BQ8TF42 649 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 KLHL6Q8WZ60 621 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 MGME1Q9BQP7 344 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 LTB4R2Q9NPC1 389 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ISYNA1Q9NPH2 558 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms