RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ACPPP15309 386 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 FOSL2P15408 326 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 HPCAL1P37235 193 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 SRSF11Q05519 484 aaKnown RBP13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 MAP7Q14244 749 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 CLCA4Q14CN2 919 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 SLC30A9Q6PML9 568 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 OR1E3Q8WZA6 343 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 DMRT3Q9NQL9 472 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 MAPRE3Q9UPY8 281 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 SNX13Q9Y5W8 968 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 GON4LQ3T8J9 2241 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 NPIPB8E9PQR5 432 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 SERPIND1P05546 499 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 PSMB5P28074 263 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 CYP4F2P78329 520 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 RHDQ02161 417 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 IZUMO2Q6UXV1 221 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 SPPL2CQ8IUH8 684 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 ZNF740Q8NDX6 193 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 VPS37AQ8NEZ2 397 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 GTF2H4Q92759 462 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 CXorf40BQ96DE9 158 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 TOE1Q96GM8 510 aaKnown RBP13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 CENPKQ9BS16 269 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 AHSPQ9NZD4 102 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 H7BY64 318 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 FOXE1O00358 373 aaPredicted RBP13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 RFXANKO14593 260 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 DFNA5O60443 496 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 PRMT3O60678 531 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 HOXC4P09017 264 aaPredicted RBP13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 PSMA4P25789 261 aaKnown RBP13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 CALRP27797 417 aaKnown RBP13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 HKDC1Q2TB90 917 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 OR4F3Q6IEY1 312 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 DNAJB8Q8NHS0 232 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 NELL1Q92832 810 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 WDR34Q96EX3 536 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 PRAP1Q96NZ9 151 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 GPR174Q9BXC1 333 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 KLHL4Q9C0H6 718 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 MUC13Q9H3R2 512 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 SH3BP4Q9P0V3 963 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 ERN1O75460 977 aaKnown RBP13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 ETHE1O95571 254 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 IL10P22301 178 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 AK4P27144 223 aaPredicted RBP13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 GRK3P35626 688 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 TFF2Q03403 129 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 LPCAT4Q643R3 524 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 DLEU7Q6UYE1 221 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 LAS2Q8IYD9 372 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 TESCQ96BS2 214 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 BMFQ96LC9 184 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 ZNF184Q99676 751 aaPredicted RBP13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 NRTNQ99748 197 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 C6orf106Q9H6K1 298 aaPredicted RBP13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 PELI2Q9HAT8 420 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 ACTR3BQ9P1U1 418 aa13.96□□□□□ -0.17
SHCBP1-201ENST00000303383 TRBV23OR9-2A0A075B6M9 112 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 GSNP06396 782 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 PTX3P26022 381 aaPredicted RBP13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 TIA1P31483 386 aaKnown RBP eCLIP13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 PIK3CBP42338 1070 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 YPEL5P62699 121 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 CTBSQ01459 385 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 RPE65Q16518 533 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 Q6ZSR6 202 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 TRIM48Q8IWZ4 208 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 PIAS4Q8N2W9 510 aaPredicted RBP13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 OR8J3Q8NGG0 315 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 OR52E1Q8NGJ3 308 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 NAF1Q96HR8 494 aaKnown RBP13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 HHIPQ96QV1 700 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 CUEDC1Q9NWM3 386 aaPredicted RBP13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 VAPAQ9P0L0 249 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 SPASTQ9UBP0 616 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 EBF1Q9UH73 591 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 INVSQ9Y283 1065 aa13.96□□□□□ -0.18
SHCBP1-201ENST00000303383 ARHGAP10A1A4S6 786 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 PRAMEF26H0Y7S4 382 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 H3BNX3 289 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 ARPC2O15144 300 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 COQ9O75208 318 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 CPSF4O95639 269 aaKnown RBP13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 CYP4F3Q08477 520 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 ILF3Q12906 894 aaKnown RBP eCLIP13.95□□□□□ -0.181e-9■■■■■ 32.3
SHCBP1-201ENST00000303383 C11orf91Q3C1V1 193 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 CPTPQ5TA50 214 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 TNIP2Q8NFZ5 429 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 OR7A2PQ8NGA2 310 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 ZUFSPQ96AP4 578 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 FAM210AQ96ND0 272 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 PANX1Q96RD7 426 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 REXO4Q9GZR2 422 aaKnown RBP13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 SPNS1Q9H2V7 528 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 VCXQ9H320 206 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 PCDHB11Q9Y5F2 797 aa13.95□□□□□ -0.18
SHCBP1-201ENST00000303383 EVPLLA8MZ36 301 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms