RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 FCRLBQ6BAA4 426 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 MZT2BQ6NZ67 158 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 DPY19L3Q6ZPD9 716 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 TCEAL4Q96EI5 215 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 C1orf109Q9NX04 203 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 SNX3O60493 162 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 SERPINA6P08185 405 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 CD70P32970 193 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 CLCN4P51793 760 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 RPS21P63220 83 aaKnown RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 BROXQ5VW32 411 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 CERS6Q6ZMG9 384 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 TMPRSS11AQ6ZMR5 421 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 PLCZ1Q86YW0 608 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 YIPF7Q8N8F6 280 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 CHST14Q8NCH0 376 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 SMG8Q8ND04 991 aaKnown RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 ZBED6CLQ96FA7 236 aaPredicted RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 TDRD1Q9BXT4 1180 aaKnown RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 FKBP7Q9Y680 259 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 KCNJ13O60928 360 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 PRKD3O94806 890 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 CDK9P50750 372 aaKnown RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 WASHC2DQ5SRD0 308 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 RNF43Q68DV7 783 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 TSPAN33Q86UF1 283 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 OR10T2Q8NGX3 314 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 OR8S1Q8NH09 359 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 SLC22A18Q96BI1 424 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 PRICKLE1Q96MT3 831 aaPredicted RBP7.58□□□□□ -1.2
SCN9A-201ENST00000303354 TRPS1Q9UHF7 1281 aa7.58□□□□□ -1.2
SCN9A-201ENST00000303354 BCKDKO14874 412 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 CSTBP04080 98 aaKnown RBP7.57□□□□□ -1.2
SCN9A-201ENST00000303354 GJA5P36382 358 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 BMPR1AP36894 532 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 ASMTP46597 345 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 QPRTQ15274 297 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 PTCHD3Q3KNS1 767 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 SLC39A4Q6P5W5 647 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 TMEM107Q6UX40 140 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 MEIOBQ8N635 442 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 EBF4Q9BQW3 602 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 ORAI3Q9BRQ5 295 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 COMMD3Q9UBI1 195 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 FBXL3Q9UKT7 428 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 DAPL1A0PJW8 107 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 FASLGP48023 281 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 ZNF676Q8N7Q3 588 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 NMUR2Q9GZQ4 415 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 GNG8Q9UK08 70 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 PCDHGA11Q9Y5H2 935 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 GPR32O75388 356 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 LYPLA2O95372 231 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 SPARCP09486 303 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 GP1BBP13224 206 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 UFM1P61960 85 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 HHEXQ03014 270 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 RAB6CQ53S08 254 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 ACSBG2Q5FVE4 666 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 NKAIN2Q5VXU1 208 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 PCYT2Q99447 389 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 ZSCAN5AQ9BUG6 496 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 RAB6CQ9H0N0 254 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 WASHC1A8K0Z3 465 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 NPIPA2E9PIF3 369 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 LOC110117498-PIK3R3F6TDL0 507 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 NPIPA3F8WFD2 350 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 SEMA4FO95754 770 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 PRKACGP22612 351 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 IL12AP29459 219 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 SLC9A3P48764 834 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 LIMK2P53671 638 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 DSTNP60981 165 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 CST6Q15828 149 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 DEFB134Q4QY38 66 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 WASH2PQ6VEQ5 465 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 TP53INP2Q8IXH6 220 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 VPS29Q9UBQ0 182 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 M0R2N6 131 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 TAF4O00268 1085 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 HAT1O14929 419 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 PAPSS2O95340 614 aaPredicted RBP7.57□□□□□ -1.2
SCN9A-201ENST00000303354 CSNK2A2P19784 350 aaPredicted RBP7.57□□□□□ -1.2
SCN9A-201ENST00000303354 NUDT6P53370 316 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 RAB39AQ14964 217 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 NKAPLQ5M9Q1 402 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 JAGN1Q8N5M9 183 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 ZDHHC12Q96GR4 267 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 NPLQ9BXD5 320 aaPredicted RBP7.57□□□□□ -1.2
SCN9A-201ENST00000303354 IFT52Q9Y366 437 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 PMF1-BGLAPU3KQ54 211 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 C2orf74A8MZ97 194 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 H3BML4 177 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 CHN2P52757 468 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 OR5M10Q6IEU7 315 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 NET1Q7Z628 596 aaPredicted RBP7.57□□□□□ -1.2
SCN9A-201ENST00000303354 ZNF100Q8IYN0 542 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 DEFB123Q8N688 67 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 TMEM40Q8WWA1 233 aa7.57□□□□□ -1.2
SCN9A-201ENST00000303354 ZSWIM3Q96MP5 696 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms