RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CSTF3Q12996 717 aaKnown RBP20.57■□□□□ 0.88
SOX17-201ENST00000297316 TBCELQ5QJ74 424 aa20.57■□□□□ 0.88
SOX17-201ENST00000297316 ZNF852Q6ZMS4 543 aa20.57■□□□□ 0.88
SOX17-201ENST00000297316 PRR23BQ6ZRT6 265 aa20.57■□□□□ 0.88
SOX17-201ENST00000297316 ANKRD46Q86W74 232 aa20.57■□□□□ 0.88
SOX17-201ENST00000297316 TRIM69Q86WT6 500 aa20.57■□□□□ 0.88
SOX17-201ENST00000297316 ZNF687Q8N1G0 1237 aa20.57■□□□□ 0.88
SOX17-201ENST00000297316 TSACCQ96A04 125 aaPredicted RBP20.57■□□□□ 0.88
SOX17-201ENST00000297316 MAGEB10Q96LZ2 347 aaPredicted RBP20.57■□□□□ 0.88
SOX17-201ENST00000297316 ZNF583Q96ND8 569 aa20.57■□□□□ 0.88
SOX17-201ENST00000297316 GUCD1Q96NT3 240 aa20.57■□□□□ 0.88
SOX17-201ENST00000297316 INPP5KQ9BT40 448 aa20.57■□□□□ 0.88
SOX17-201ENST00000297316 MENTQ9BUN1 341 aa20.57■□□□□ 0.88
SOX17-201ENST00000297316 IMP3Q9NV31 184 aaKnown RBP20.57■□□□□ 0.88
SOX17-201ENST00000297316 TRBV5-3A0A0A0MS03 114 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 EME2A4GXA9 379 aaPredicted RBP20.56■□□□□ 0.88
SOX17-201ENST00000297316 LRRC72A6NJI9 287 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 TXNDC9O14530 226 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 TPST1O60507 370 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 SEMA4FO95754 770 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 HNF4AP41235 474 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 FOXB2Q5VYV0 432 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 ERMP1Q7Z2K6 904 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 HOMEZQ8IX15 550 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 DTWD1Q8N5C7 304 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 ZNF740Q8NDX6 193 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 OR7G3Q8NG95 312 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 OR8J3Q8NGG0 315 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 BTBD9Q96Q07 612 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 HHIPQ96QV1 700 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 FERD3LQ96RJ6 166 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 TIMM29Q9BSF4 260 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 PAIP1Q9H074 479 aaKnown RBP20.56■□□□□ 0.88
SOX17-201ENST00000297316 COQ10BQ9H8M1 238 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 USP36Q9P275 1121 aaKnown RBP20.56■□□□□ 0.88
SOX17-201ENST00000297316 VPS29Q9UBQ0 182 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 ACSL5Q9ULC5 683 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 TMED5Q9Y3A6 229 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 FAM149AA5PLN7 773 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 FPGTO14772 594 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 AKAP10O43572 662 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 AHCYL1O43865 530 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 PSMB5P28074 263 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 E2F2Q14209 437 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 CYP51A1Q16850 503 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 IRAK1BP1Q5VVH5 260 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 GCNT7Q6ZNI0 430 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 C10orf111Q8N326 155 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 HUS1BQ8NHY5 278 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 ASB12Q8WXK4 309 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 EME1Q96AY2 570 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 PPWD1Q96BP3 646 aaKnown RBP20.56■□□□□ 0.88
SOX17-201ENST00000297316 MSANTD3Q96H12 275 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 SLC29A1Q99808 456 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 PRM3Q9NNZ6 103 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 PRDM6Q9NQX0 595 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 GPRC5BQ9NZH0 403 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 SCHIP1Q9P0W5 487 aaPredicted RBP20.56■□□□□ 0.88
SOX17-201ENST00000297316 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.56■□□□□ 0.88
SOX17-201ENST00000297316 DUSP12Q9UNI6 340 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 DYRK1BQ9Y463 629 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 V9GYQ6 96 aa20.56■□□□□ 0.88
SOX17-201ENST00000297316 SNRNP200O75643 2136 aaKnown RBP20.55■□□□□ 0.88
SOX17-201ENST00000297316 HEATR5BQ9P2D3 2071 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 KRBA1A5PL33 1030 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 PRR19A6NJB7 356 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 LYNP07948 512 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 HNRNPA2B1P22626 353 aaKnown RBP20.55■□□□□ 0.88
SOX17-201ENST00000297316 AK4P27144 223 aaPredicted RBP20.55■□□□□ 0.88
SOX17-201ENST00000297316 CDKN2CP42773 168 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 SLBPQ14493 270 aaKnown RBP eCLIP20.55■□□□□ 0.88
SOX17-201ENST00000297316 NRF1Q16656 503 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 PGS1Q32NB8 556 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 LEXMQ3ZCV2 418 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 FAM160A2Q8N612 972 aaPredicted RBP20.55■□□□□ 0.88
SOX17-201ENST00000297316 CCL4L1Q8NHW4 92 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 RLN3Q8WXF3 142 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 C11orf24Q96F05 449 aaPredicted RBP20.55■□□□□ 0.88
SOX17-201ENST00000297316 AURKBQ96GD4 344 aaPredicted RBP20.55■□□□□ 0.88
SOX17-201ENST00000297316 CIB1Q99828 191 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 TRIT1Q9H3H1 467 aaKnown RBP20.55■□□□□ 0.88
SOX17-201ENST00000297316 MUC13Q9H3R2 512 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 XKR8Q9H6D3 395 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 PCDHB3Q9Y5E6 796 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 FANCMQ8IYD8 2048 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 PDZK1P1A8MUH7 402 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 EML2O95834 649 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 C1QCP02747 245 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 GSNP06396 782 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 ZCCHC18P0CG32 403 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 CKMT2P17540 419 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 S100A3P33764 101 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 PRAMEF14Q5SWL7 426 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 PRAMEF13Q5VWM6 474 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 PHACTR4Q8IZ21 702 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 CATSPER1Q8NEC5 780 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 SLC5A11Q8WWX8 675 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 EFHD1Q9BUP0 239 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 FOXQ1Q9C009 403 aa20.55■□□□□ 0.88
SOX17-201ENST00000297316 RMI1Q9H9A7 625 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms