RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 CCDC115Q96NT0 180 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 C2orf49Q9BVC5 232 aaPredicted RBP12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 IL26Q9NPH9 171 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 TOR4AQ9NXH8 423 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 PCDHGB3Q9Y5G1 929 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 NUMA1Q14980 2115 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 IGLV3-10A0A075B6K4 115 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 OR6C75A6NL08 312 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 M0QX08 132 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 COCHO43405 550 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 LAMP1P11279 417 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 CKMT1AP12532 417 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 HMGCLP35914 325 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 SELENBP1Q13228 472 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 SPDYE7PQ495Y7 208 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 MRPL10Q7Z7H8 261 aaKnown RBP12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 C2orf73Q8N5S3 287 aaPredicted RBP12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 C1orf52Q8N6N3 182 aaKnown RBP12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 C11orf65Q8NCR3 313 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 DYNC2LI1Q8TCX1 351 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 CPPED1Q9BRF8 314 aaPredicted RBP12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 SGK2Q9HBY8 427 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 DYRK4Q9NR20 520 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 MS4A12Q9NXJ0 267 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 PCDH10Q9P2E7 1040 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 BOLA1Q9Y3E2 137 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 CTDSP2O14595 271 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 SLC16A6O15403 523 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 TMCC2O75069 709 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 TSC22D2O75157 780 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 SNX4O95219 450 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 SOX14O95416 240 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 PRPS1L1P21108 318 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 SERPINA4P29622 427 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 SLC15A1P46059 708 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 BCL2A1Q16548 175 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 PDZK1Q5T2W1 519 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 TYW3Q6IPR3 259 aaKnown RBP12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 C11orf96Q7Z7L8 435 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 SLC5A8Q8N695 610 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 CELF2-AS1Q8N7Q2 184 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 BEND7Q8N7W2 519 aaPredicted RBP12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 MAGIXQ9H6Y5 334 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 BRD9Q9H8M2 597 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 TMCC3Q9ULS5 477 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 PMF1-BGLAPU3KQ54 211 aa12.19□□□□□ -0.46
TMEM200A-201ENST00000296978 SMAD6O43541 496 aaKnown RBP12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 CSF2P04141 144 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 SERPIND1P05546 499 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 EPORP19235 508 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 HOXD11P31277 338 aaPredicted RBP12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 CCL23P55773 120 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 CLPPQ16740 277 aaPredicted RBP12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 ERICH5Q6P6B1 374 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 NLGN4XQ8N0W4 816 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 CSGALNACT1Q8TDX6 532 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 PEX16Q9Y5Y5 336 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 CEP290O15078 2479 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 TRIM64A6NGJ6 449 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 AGAP5A6NIR3 686 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 ANKRD28O15084 1053 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 KIAA0513O60268 411 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 TPST2O60704 377 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 OAZ2O95190 189 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 ELNP15502 786 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 PCMT1P22061 227 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 HNF1BP35680 557 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 RTP2Q5QGT7 225 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 LYSMD2Q8IV50 215 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 ZZZ3Q8IYH5 903 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 CACTIN-AS1Q8N1I8 211 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 DEPDC4Q8N2C3 294 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 OR9Q2Q8NGE9 314 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 VANGL1Q8TAA9 524 aaPredicted RBP12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 PIH1D2Q8WWB5 315 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 MTERF3Q96E29 417 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 PKMYT1Q99640 499 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 ACAT2Q9BWD1 397 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 RNF38Q9H0F5 515 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 CLN6Q9NWW5 311 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 KIAA1522Q9P206 1035 aaPredicted RBP12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 VPS29Q9UBQ0 182 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 FBXO10Q9UK96 956 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 ACSL6Q9UKU0 697 aa12.18□□□□□ -0.46
TMEM200A-201ENST00000296978 GRXCR2A6NFK2 248 aa12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 TTC34A8MYJ7 566 aa12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 H7C4K7 107 aa12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 IGSF6O95976 241 aa12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 KLKB1P03952 638 aa12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 BPIP17213 487 aa12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 ATP6V1E1P36543 226 aa12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 TUBA1BP68363 451 aa12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 CYP4F8P98187 520 aa12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 SRSF11Q05519 484 aaKnown RBP12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 RING1Q06587 406 aa12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 PROX2Q3B8N5 592 aa12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 TIMM50Q3ZCQ8 353 aa12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 CLLU1OSQ5K130 101 aa12.17□□□□□ -0.46
TMEM200A-201ENST00000296978 CD300LGQ6UXG3 332 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms