RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 NRF1Q16656 503 aa8.82□□□□□ -1
PDPN-201ENST00000294489 PUS10Q3MIT2 529 aaKnown RBP8.82□□□□□ -1
PDPN-201ENST00000294489 SPIN4Q56A73 249 aa8.82□□□□□ -1
PDPN-201ENST00000294489 RUNDC3AQ59EK9 446 aa8.82□□□□□ -1
PDPN-201ENST00000294489 HMBOX1Q6NT76 420 aa8.82□□□□□ -1
PDPN-201ENST00000294489 APLFQ8IW19 511 aaPredicted RBP8.82□□□□□ -1
PDPN-201ENST00000294489 DCUN1D3Q8IWE4 304 aa8.82□□□□□ -1
PDPN-201ENST00000294489 RIMKLAQ8IXN7 391 aa8.82□□□□□ -1
PDPN-201ENST00000294489 MARVELD2Q8N4S9 558 aa8.82□□□□□ -1
PDPN-201ENST00000294489 OR10A6Q8NH74 314 aa8.82□□□□□ -1
PDPN-201ENST00000294489 HUS1BQ8NHY5 278 aa8.82□□□□□ -1
PDPN-201ENST00000294489 TFGQ92734 400 aaPredicted RBP8.82□□□□□ -1
PDPN-201ENST00000294489 BIRC7Q96CA5 298 aa8.82□□□□□ -1
PDPN-201ENST00000294489 CENPNQ96H22 339 aaPredicted RBP8.82□□□□□ -1
PDPN-201ENST00000294489 ZNF583Q96ND8 569 aa8.82□□□□□ -1
PDPN-201ENST00000294489 CCDC115Q96NT0 180 aa8.82□□□□□ -1
PDPN-201ENST00000294489 CIB1Q99828 191 aa8.82□□□□□ -1
PDPN-201ENST00000294489 EBPLQ9BY08 206 aa8.82□□□□□ -1
PDPN-201ENST00000294489 TWSG1Q9GZX9 223 aa8.82□□□□□ -1
PDPN-201ENST00000294489 RPF2Q9H7B2 306 aaKnown RBP8.82□□□□□ -1
PDPN-201ENST00000294489 AGPAT4Q9NRZ5 378 aa8.82□□□□□ -1
PDPN-201ENST00000294489 TM7SF3Q9NS93 570 aa8.82□□□□□ -1
PDPN-201ENST00000294489 PDP2Q9P2J9 529 aa8.82□□□□□ -1
PDPN-201ENST00000294489 EBF1Q9UH73 591 aa8.82□□□□□ -1
PDPN-201ENST00000294489 BRWD1Q9NSI6 2320 aa8.81□□□□□ -1
PDPN-201ENST00000294489 TBC1D3DA0A087WVF3 549 aa8.81□□□□□ -1
PDPN-201ENST00000294489 TBC1D3IA0A087WXS9 549 aa8.81□□□□□ -1
PDPN-201ENST00000294489 TBC1D3EA0A087X179 549 aa8.81□□□□□ -1
PDPN-201ENST00000294489 TBC1D3KA0A087X1G2 549 aa8.81□□□□□ -1
PDPN-201ENST00000294489 TBC1D3FA6NER0 549 aaPredicted RBP8.81□□□□□ -1
PDPN-201ENST00000294489 TBC1D3LB9A6J9 549 aa8.81□□□□□ -1
PDPN-201ENST00000294489 ANXA6P08133 673 aa8.81□□□□□ -1
PDPN-201ENST00000294489 TBC1D3HP0C7X1 549 aa8.81□□□□□ -1
PDPN-201ENST00000294489 C1GALT1C1LP0DN25 315 aa8.81□□□□□ -1
PDPN-201ENST00000294489 GGT1P19440 569 aa8.81□□□□□ -1
PDPN-201ENST00000294489 HSD17B2P37059 387 aa8.81□□□□□ -1
PDPN-201ENST00000294489 ASMTP46597 345 aa8.81□□□□□ -1
PDPN-201ENST00000294489 C21orf58P58505 322 aa8.81□□□□□ -1
PDPN-201ENST00000294489 PRKCQQ04759 706 aa8.81□□□□□ -1
PDPN-201ENST00000294489 LAPTM5Q13571 262 aa8.81□□□□□ -1
PDPN-201ENST00000294489 LRIF1Q5T3J3 769 aa8.81□□□□□ -1
PDPN-201ENST00000294489 ATG9BQ674R7 924 aa8.81□□□□□ -1
PDPN-201ENST00000294489 TBC1D3GQ6DHY5 549 aa8.81□□□□□ -1
PDPN-201ENST00000294489 TBC1D3CQ6IPX1 549 aa8.81□□□□□ -1
PDPN-201ENST00000294489 SYT13Q7L8C5 426 aa8.81□□□□□ -1
PDPN-201ENST00000294489 TBC1D3Q8IZP1 549 aaPredicted RBP8.81□□□□□ -1
PDPN-201ENST00000294489 DTWD1Q8N5C7 304 aa8.81□□□□□ -1
PDPN-201ENST00000294489 SPDYE1Q8NFV5 336 aaPredicted RBP8.81□□□□□ -1
PDPN-201ENST00000294489 SLC5A11Q8WWX8 675 aa8.81□□□□□ -1
PDPN-201ENST00000294489 GFM2Q969S9 779 aaKnown RBP8.81□□□□□ -1
PDPN-201ENST00000294489 EGLN2Q96KS0 407 aa8.81□□□□□ -1
PDPN-201ENST00000294489 CD93Q9NPY3 652 aa8.81□□□□□ -1
PDPN-201ENST00000294489 SIRT5Q9NXA8 310 aa8.81□□□□□ -1
PDPN-201ENST00000294489 SLC25A37Q9NYZ2 338 aa8.81□□□□□ -1
PDPN-201ENST00000294489 SPATA7Q9P0W8 599 aa8.81□□□□□ -1
PDPN-201ENST00000294489 USP22Q9UPT9 525 aa8.81□□□□□ -1
PDPN-201ENST00000294489 PCDHB14Q9Y5E9 798 aa8.81□□□□□ -1
PDPN-201ENST00000294489 TCRBV21S2A2A0A5A6 115 aa8.81□□□□□ -1
PDPN-201ENST00000294489 ELOVL7A1L3X0 281 aa8.81□□□□□ -1
PDPN-201ENST00000294489 RFXANKO14593 260 aa8.81□□□□□ -1
PDPN-201ENST00000294489 APBB3O95704 486 aa8.81□□□□□ -1
PDPN-201ENST00000294489 COX7A2P14406 83 aa8.81□□□□□ -1
PDPN-201ENST00000294489 CCR5P51681 352 aa8.81□□□□□ -1
PDPN-201ENST00000294489 CHN2P52757 468 aa8.81□□□□□ -1
PDPN-201ENST00000294489 POLE2P56282 527 aa8.81□□□□□ -1
PDPN-201ENST00000294489 PHC1P78364 1004 aa8.81□□□□□ -1
PDPN-201ENST00000294489 SLBPQ14493 270 aaKnown RBP eCLIP8.81□□□□□ -1
PDPN-201ENST00000294489 LCTLQ6UWM7 567 aa8.81□□□□□ -1
PDPN-201ENST00000294489 LAS2Q8IYD9 372 aa8.81□□□□□ -1
PDPN-201ENST00000294489 ST13P4Q8IZP2 240 aaPredicted RBP8.81□□□□□ -1
PDPN-201ENST00000294489 PACRGLQ8N7B6 248 aa8.81□□□□□ -1
PDPN-201ENST00000294489 PAPD5Q8NDF8 572 aaKnown RBP8.81□□□□□ -1
PDPN-201ENST00000294489 CDC26Q8NHZ8 85 aa8.81□□□□□ -1
PDPN-201ENST00000294489 NELL1Q92832 810 aa8.81□□□□□ -1
PDPN-201ENST00000294489 KLK6Q92876 244 aa8.81□□□□□ -1
PDPN-201ENST00000294489 UBE2E3Q969T4 207 aa8.81□□□□□ -1
PDPN-201ENST00000294489 ZNF597Q96LX8 424 aa8.81□□□□□ -1
PDPN-201ENST00000294489 CDX2Q99626 313 aaPredicted RBP8.81□□□□□ -1
PDPN-201ENST00000294489 C9orf16Q9BUW7 83 aa8.81□□□□□ -1
PDPN-201ENST00000294489 OSBPL11Q9BXB4 747 aa8.81□□□□□ -1
PDPN-201ENST00000294489 PAIP1Q9H074 479 aaKnown RBP8.81□□□□□ -1
PDPN-201ENST00000294489 GORASP2Q9H8Y8 452 aa8.81□□□□□ -1
PDPN-201ENST00000294489 C8orf4Q9NR00 106 aa8.81□□□□□ -1
PDPN-201ENST00000294489 GPR27Q9NS67 375 aa8.81□□□□□ -1
PDPN-201ENST00000294489 PPT2Q9UMR5 302 aa8.81□□□□□ -1
PDPN-201ENST00000294489 NEUROG3Q9Y4Z2 214 aa8.81□□□□□ -1
PDPN-201ENST00000294489 HS3ST3A1Q9Y663 406 aa8.81□□□□□ -1
PDPN-201ENST00000294489 PCM1Q15154 2024 aa8.81□□□□□ -1
PDPN-201ENST00000294489 DPPA5A6NC42 116 aa8.8□□□□□ -1
PDPN-201ENST00000294489 ACADMP11310 421 aa8.8□□□□□ -1
PDPN-201ENST00000294489 CDH1P12830 882 aa8.8□□□□□ -1
PDPN-201ENST00000294489 TRPC1P48995 793 aa8.8□□□□□ -1
PDPN-201ENST00000294489 DGKEP52429 567 aa8.8□□□□□ -1
PDPN-201ENST00000294489 HNRNPFP52597 415 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 PHEXP78562 749 aa8.8□□□□□ -1
PDPN-201ENST00000294489 MTAPQ13126 283 aa8.8□□□□□ -1
PDPN-201ENST00000294489 FAM98BQ52LJ0 330 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 CATSPEREQ5SY80 951 aa8.8□□□□□ -1
PDPN-201ENST00000294489 OR4F3Q6IEY1 312 aa8.8□□□□□ -1
PDPN-201ENST00000294489 PPP4R4Q6NUP7 873 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms