RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 HRH2P25021 359 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 FAUP35544 74 aaKnown RBP17.99■□□□□ 0.47
PCDH1-201ENST00000287008 SLC18A1P54219 525 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 WDR5P61964 334 aaKnown RBP17.99■□□□□ 0.47
PCDH1-201ENST00000287008 CDK6Q00534 326 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 PCBP2Q15366 365 aaKnown RBP eCLIP17.99■□□□□ 0.47
PCDH1-201ENST00000287008 CXorf57Q6NSI4 855 aaKnown RBP17.99■□□□□ 0.47
PCDH1-201ENST00000287008 IL22RA1Q8N6P7 574 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 OR10H4Q8NGA5 316 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 FIBINQ8TAL6 211 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 MR1Q95460 341 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 LRRC58Q96CX6 371 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 PLEKHG4BQ96PX9 1271 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 ARHGAP9Q9BRR9 750 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 PDCD10Q9BUL8 212 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 TRIM8Q9BZR9 551 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 FBRSQ9HAH7 460 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 PRSS51A0A1B0GVH4 220 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 IGLON5A6NGN9 336 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 PCDHGA12O60330 932 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 C1orf220Q5T0J3 134 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 CRYGNQ8WXF5 182 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 C17orf62Q9BQA9 187 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 PDLIM7Q9NR12 457 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 AQP12BA6NM10 295 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 TMEM233B4DJY2 109 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 TNFRSF21O75509 655 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 CCT3P49368 545 aaKnown RBP17.98■□□□□ 0.47
PCDH1-201ENST00000287008 RPS6KA3P51812 740 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 DSC3Q14574 896 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 LACTB2Q53H82 288 aaPredicted RBP17.98■□□□□ 0.47
PCDH1-201ENST00000287008 CEACAM20Q6UY09 585 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 AQP12AQ8IXF9 295 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 MMABQ96EY8 250 aaPredicted RBP17.98■□□□□ 0.47
PCDH1-201ENST00000287008 OR52B2Q96RD2 323 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 COMMD4Q9H0A8 199 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 METTL7AQ9H8H3 244 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 IL21RQ9HBE5 538 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 MS4A12Q9NXJ0 267 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 RBMXL2O75526 392 aaKnown RBP17.98■□□□□ 0.47
PCDH1-201ENST00000287008 SERPINA3P01011 423 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 ITGB1P05556 798 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 PGRP06401 933 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 PFKLP17858 780 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 HNRNPKP61978 463 aaKnown RBP eCLIP17.98■□□□□ 0.47
PCDH1-201ENST00000287008 ACSBG2Q5FVE4 666 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 TIFABQ6ZNK6 161 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 MRGPRX2Q96LB1 330 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 MVB12BQ9H7P6 319 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 TRIM39Q9HCM9 518 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 ZDHHC2Q9UIJ5 367 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 CD207Q9UJ71 328 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 M0QX08 132 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 MAFKO60675 156 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 ZNF217O75362 1048 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 KLHL18O94889 574 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 DUOXA1Q1HG43 343 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 S100ZQ8WXG8 99 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 RC3H2Q9HBD1 1191 aaKnown RBP17.98■□□□□ 0.47
PCDH1-201ENST00000287008 K7ERQ8 282 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 BTN3A3O00478 584 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 GBAP04062 536 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 LINGO3P0C6S8 592 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 QPRTQ15274 297 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 EMC10Q5UCC4 262 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 GPR153Q6NV75 609 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 ZBTB46Q86UZ6 589 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 LRRTM3Q86VH5 581 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 ZSWIM3Q96MP5 696 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 PDE7BQ9NP56 450 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 GPR34Q9UPC5 381 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 PSAT1Q9Y617 370 aa17.98■□□□□ 0.47
PCDH1-201ENST00000287008 BCHEP06276 602 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 ASGR2P07307 311 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 NR2C1P13056 603 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 CROCCP3Q8IVE0 287 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 GEMIN6Q8WXD5 167 aaKnown RBP17.97■□□□□ 0.47
PCDH1-201ENST00000287008 CADM1Q9BY67 442 aaKnown RBP17.97■□□□□ 0.47
PCDH1-201ENST00000287008 TPT1P8Q9HAU6 139 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 TMLHEQ9NVH6 421 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 MAN2B2Q9Y2E5 1009 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 PCDHGB7Q9Y5F8 929 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 DUX1O43812 170 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 C8orf89P0DMQ9 161 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 DEFB103AP81534 67 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 ZNF763Q0D2J5 394 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 RASGEF1BQ0VAM2 473 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 GANABQ14697 944 aaKnown RBP17.97■□□□□ 0.47
PCDH1-201ENST00000287008 LASP1Q14847 261 aaKnown RBP17.97■□□□□ 0.47
PCDH1-201ENST00000287008 TLR1Q15399 786 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 RBM44Q6ZP01 1051 aaKnown RBP17.97■□□□□ 0.47
PCDH1-201ENST00000287008 TTC9BQ8N6N2 239 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 OR5K1Q8NHB7 308 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 PHOSPHO2Q8TCD6 241 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 PHOSPHO1Q8TCT1 267 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 FAM3CQ92520 227 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 TPSD1Q9BZJ3 242 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 PTGES2Q9H7Z7 377 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 GDE1Q9NZC3 331 aa17.97■□□□□ 0.47
PCDH1-201ENST00000287008 CYTH4Q9UIA0 394 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms