RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 XKR7Q5GH72 579 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 C10orf62Q5T681 223 aaPredicted RBP18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 TMIGD1Q6UXZ0 262 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 TRIM46Q7Z4K8 759 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 ADCK2Q7Z695 626 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 ZNF740Q8NDX6 193 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 CEP70Q8NHQ1 597 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 SELENOMQ8WWX9 145 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 MTFMTQ96DP5 389 aaKnown RBP18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 CCDC106Q9BWC9 280 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 KCNH6Q9H252 994 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 EPB41L1Q9H4G0 881 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 POMT2Q9UKY4 750 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 SLC12A4Q9UP95 1085 aa18.17■□□□□ 0.5
PDLIM3-202ENST00000284770 IGHV1OR21-1A0A087WYE8 117 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 SERTM1A2A2V5 107 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 TNFSF14O43557 240 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 LMNAP02545 664 aaKnown RBP18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 GRIA3P42263 894 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 OR1D5P58170 312 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 GPLD1P80108 840 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 REEP5Q00765 189 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 SPEM2Q0P670 501 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 ZNF425Q6IV72 752 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 LARP4Q71RC2 724 aaKnown RBP eCLIP18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 HBEGFQ99075 208 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 RAB33BQ9H082 229 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 ABCG4Q9H172 646 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 NT5DC2Q9H857 520 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 SEMA4GQ9NTN9 838 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 FAM86C1Q9NVL1 165 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 TSC22D4Q9Y3Q8 395 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 KLK4Q9Y5K2 254 aa18.16■□□□□ 0.5
PDLIM3-202ENST00000284770 A0A0J9YY10 115 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 ATP6AP2A0A1C7CYW4 349 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 EME2A4GXA9 379 aaPredicted RBP18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 CDX4O14627 284 aaPredicted RBP18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 B4GAT1O43505 415 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 LRP3O75074 770 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 VPS4BO75351 444 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 ATP6AP2O75787 350 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 T-ENOLP0DO92 83 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 GRK6P43250 576 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 PPP1CAP62136 330 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 UBAP2LQ14157 1087 aaKnown RBP18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 Q6ZSR9 355 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 TRIM73Q86UV7 250 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 TREML1Q86YW5 311 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 ZUFSPQ96AP4 578 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 CCDC74AQ96AQ1 378 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 AHCYL2Q96HN2 611 aaKnown RBP18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 ZNF385DQ9H6B1 395 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 EPHA6Q9UF33 1036 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 TRIM33Q9UPN9 1127 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 KLHL20Q9Y2M5 609 aa18.15■□□□□ 0.5
PDLIM3-202ENST00000284770 SLC28A1O00337 649 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 ZW10O43264 779 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 PCNAP12004 261 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 CKMT1AP12532 417 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 GRK3P35626 688 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 LSSP48449 732 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 SLC14A1Q13336 389 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 KRT72Q14CN4 511 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 NAA25Q14CX7 972 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 CSRP2Q16527 193 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 PROX2Q3B8N5 592 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 NKAIN2Q5VXU1 208 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 TMEM198Q66K66 360 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 NXNQ6DKJ4 435 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 GUSBP11Q6P575 273 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 CHSY3Q70JA7 882 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 Q8N9G6 341 aaPredicted RBP18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 OR2T11Q8NH01 316 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 HUS1BQ8NHY5 278 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 NAT6Q93015 286 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 MTERF1Q99551 399 aaKnown RBP18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 SARGQ9BW04 601 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 AKTIPQ9H8T0 292 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 EVA1BQ9NVM1 165 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 RIC8BQ9NVN3 520 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 ANKMY1Q9P2S6 941 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 NCDNQ9UBB6 729 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 BTBD3Q9Y2F9 522 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 CCL27Q9Y4X3 112 aa18.14■□□□□ 0.5
PDLIM3-202ENST00000284770 CUL9Q8IWT3 2517 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 FRYLO94915 3013 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 FEZF1A0PJY2 475 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 CPED1A4D0V7 1026 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 NCF2P19878 526 aaPredicted RBP18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 MAGP20916 626 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 PPM1FP49593 454 aaPredicted RBP18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 RBBP5Q15291 538 aaKnown RBP18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 INAVAQ3KP66 663 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 ADNP2Q6IQ32 1131 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 IRGCQ6NXR0 463 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 FIGLAQ6QHK4 219 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 SPRED1Q7Z699 444 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 PAQR7Q86WK9 346 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 NCSTNQ92542 709 aa18.14■□□□□ 0.49
PDLIM3-202ENST00000284770 TUBGCP3Q96CW5 907 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms