RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CHRNA6Q15825 494 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 ARL9Q6T311 187 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 CILP2Q8IUL8 1156 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 GEMIN6Q8WXD5 167 aaKnown RBP16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 TP63Q9H3D4 680 aaPredicted RBP16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 CD93Q9NPY3 652 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 PSMD9O00233 223 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 SOX14O95416 240 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 SELPP16109 830 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 PGGT1BP53609 377 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 DUOXA1Q1HG43 343 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 ANKDD1AQ495B1 522 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 MINDY4Q4G0A6 757 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 TMED9Q9BVK6 235 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 ATRNL1Q5VV63 1379 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 CBX5P45973 191 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 PITPNAQ00169 270 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 GALNT2Q10471 571 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 GPR33Q49SQ1 333 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 ZNF678Q5SXM1 525 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 ADGRD2Q7Z7M1 963 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 LGALS12Q96DT0 336 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 CCM2LQ9NUG4 571 aaPredicted RBP16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 MARK1Q9P0L2 795 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 DLGAP1O14490 977 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 RASAL1O95294 804 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 CH25HO95992 272 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 BCHEP06276 602 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 H1F0P07305 194 aaKnown RBP16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 ALAS2P22557 587 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 SLC5A2P31639 672 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 CEACAM7Q14002 265 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 ZNF234Q14588 700 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 TMEM199Q8N511 208 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 GPR151Q8TDV0 419 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 BORCS6Q96GS4 357 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 FUNDC2Q9BWH2 189 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 COMMD4Q9H0A8 199 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 COLEC10Q9Y6Z7 277 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 CSF2P04141 144 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 EFR3AQ14156 821 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 AQP11Q8NBQ7 271 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 FBXO22Q8NEZ5 403 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 C1orf216Q8TAB5 229 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 KCTD13Q8WZ19 329 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 TPT1P8Q9HAU6 139 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 SIX4Q9UIU6 781 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 MED31Q9Y3C7 131 aa16.01■□□□□ 0.15
SH3RF1-201ENST00000284637 SNED1Q8TER0 1413 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 PRORSD1PA6NEY8 169 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 MANBAO00462 879 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 DCLK1O15075 740 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 RASGRP1O95267 797 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 S100GP29377 79 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 NR4A2P43354 598 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 MLLT6P55198 1093 aaPredicted RBP16■□□□□ 0.15
SH3RF1-201ENST00000284637 CDK6Q00534 326 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 RPA4Q13156 261 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 ZNF615Q8N8J6 731 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 ANKFN1Q8N957 763 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 NFKBIDQ8NI38 313 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 FUBP3Q96I24 572 aaKnown RBP eCLIP16■□□□□ 0.15
SH3RF1-201ENST00000284637 UBQLN2Q9UHD9 624 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 TLX2O43763 284 aaPredicted RBP16■□□□□ 0.15
SH3RF1-201ENST00000284637 DUSP11O75319 330 aaKnown RBP16■□□□□ 0.15
SH3RF1-201ENST00000284637 RBMXL2O75526 392 aaKnown RBP16■□□□□ 0.15
SH3RF1-201ENST00000284637 KLK1P06870 262 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 MYF6P23409 242 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 DDX6P26196 483 aaKnown RBP eCLIP16■□□□□ 0.15
SH3RF1-201ENST00000284637 ABHD18Q0P651 414 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 TCEAL1Q15170 157 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 UBE2UQ5VVX9 321 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 ZC3H3Q8IXZ2 948 aaKnown RBP16■□□□□ 0.15
SH3RF1-201ENST00000284637 NXPE1Q8N323 547 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 TOMM5Q8N4H5 51 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 KIAA1191Q96A73 305 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 ANKRD60Q9BZ19 345 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 GPR88Q9GZN0 384 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 SMOXQ9NWM0 555 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 FBXL21Q9UKT6 434 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 RNF11Q9Y3C5 154 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 L7N2F9 121 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 SNAPC5O75971 98 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 TFAP2AP05549 437 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 CD40LGP29965 261 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 GMPRP36959 345 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 ZNF81P51508 661 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 KCNAB2Q13303 367 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 SEMA3AQ14563 771 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 NANOGP8Q6NSW7 305 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 SYVN1Q86TM6 617 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 GPR135Q8IZ08 494 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 WACQ9BTA9 647 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 NANOGQ9H9S0 305 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 TIGARQ9NQ88 270 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 ZDHHC3Q9NYG2 299 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 M0R233 179 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 ARVCFO00192 962 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 SDHDO14521 159 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 OPRL1P41146 370 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms