RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 SCARB2Q14108 478 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 LRP8Q14114 963 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 FGL2Q14314 439 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 NPTX1Q15818 432 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 PKDCCQ504Y2 493 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ESCO2Q56NI9 601 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 PRAMEF19Q5SWL8 479 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 FSTL4Q6MZW2 842 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 SH3RF1Q7Z6J0 888 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 CLNKQ7Z7G1 428 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF440Q8IYI8 595 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 VGLL2Q8N8G2 317 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 DBF4BQ8NFT6 615 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 TOP1MTQ969P6 601 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 KIAA1191Q96A73 305 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 FCRL5Q96RD9 977 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 CD180Q99467 661 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 POTEKPQ9BYX7 375 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 OR8D2Q9GZM6 311 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 EIF3KQ9UBQ5 218 aaKnown RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 IL36AQ9UHA7 158 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 LIPT1Q9Y234 373 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ADAM18Q9Y3Q7 739 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 DUOX1Q9NRD9 1551 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ARID1AO14497 2285 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 C2CD4BA6NLJ0 364 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 NPIPA2E9PIF3 369 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 NPIPA3F8WFD2 350 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 SOCS5O75159 536 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 TSPAN9O75954 239 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GADD45GO95257 159 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 IFNA1P01562 189 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 EPOP01588 193 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 FESP07332 822 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ITGA5P08648 1049 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 SNHG28P0DPA3 235 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 BCKDHAP12694 445 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF12P17014 697 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 S100A2P29034 98 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 UGT2B10P36537 528 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GRIA1P42261 906 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 CDKN2BP42772 138 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 HSPA7P48741 367 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 XKP51811 444 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 PRKCZQ05513 592 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 RBPJQ06330 500 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 NIPAL4Q0D2K0 466 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ST3GAL3Q11203 375 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 TRAM1Q15629 374 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 RBM20Q5T481 1227 aaKnown RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 SYCE2Q6PIF2 218 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 DCDC5Q6ZRR9 648 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 LINGO2Q7L985 606 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 FAM46DQ8NEK8 389 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 BBS10Q8TAM1 723 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GPR152Q8TDT2 470 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ALG3Q92685 438 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 LENG1Q96BZ8 264 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 MFSD3Q96ES6 412 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 TRPV4Q9HBA0 871 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 NANSQ9NR45 359 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 LGALS13Q9UHV8 139 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 TFR2Q9UP52 801 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 PDE10AQ9Y233 779 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 PCDHAC2Q9Y5I4 1007 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 IQCF5A8MTL0 148 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 C2orf74A8MZ97 194 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 TBX1O43435 398 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 PPM1BO75688 479 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GOT2P00505 430 aaKnown RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GALK1P51570 392 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 IST1P53990 364 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 TUBA4AP68366 448 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 NRG1Q02297 640 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GBE1Q04446 702 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 BNIP1Q12981 228 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GRIK2Q13002 908 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 SIM2Q14190 667 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 PTPRCAPQ14761 206 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 DPYSL2Q16555 572 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 CATSPEREQ5SY80 951 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 KIAA0895LQ68EN5 471 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 OR52E8Q6IFG1 317 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 ENPP7Q6UWV6 458 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 HFE2Q6ZVN8 426 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 DCP2Q8IU60 420 aaKnown RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 MMAAQ8IVH4 418 aaKnown RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 CBR4Q8N4T8 237 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 IL17RCQ8NAC3 791 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 OR2L2Q8NH16 312 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 FAM84AQ96KN4 292 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 CDCA3Q99618 268 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 RIOK2Q9BVS4 552 aaKnown RBP3.96□□□□□ -1.78
SCN3A-201ENST00000283254 SLC5A7Q9GZV3 580 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 FN3KQ9H479 309 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 SACM1LQ9NTJ5 587 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 TAS2R9Q9NYW1 312 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 DKK3Q9UBP4 350 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 GRHPRQ9UBQ7 328 aa3.96□□□□□ -1.78
SCN3A-201ENST00000283254 CYTH4Q9UIA0 394 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms