RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 NDUFS2O75306 463 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 GABARAPO95166 117 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 FKBP9O95302 570 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 UGT2B4P06133 528 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 OR56A5P0C7T3 313 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 DMDP11532 3685 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 ACVR2AP27037 513 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 AP1S2P56377 157 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 C21orf58P58505 322 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 MVKQ03426 396 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 LAPTM5Q13571 262 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 ZNF846Q147U1 533 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 GTDC1Q4AE62 458 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 OR2T5Q6IEZ7 315 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 SLC16A12Q6ZSM3 486 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 TMEM179BQ7Z7N9 219 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 TMEM150AQ86TG1 271 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 ZDHHC21Q8IVQ6 265 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 HS3ST5Q8IZT8 346 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 SIX5Q8N196 739 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 CPXM2Q8N436 756 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 OR2T29Q8NH02 315 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 S100ZQ8WXG8 99 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 STARD8Q92502 1023 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 SCRN2Q96FV2 425 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 APOL4Q9BPW4 351 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 SPATA9Q9BWV2 254 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 WDR12Q9GZL7 423 aaKnown RBP12.51□□□□□ -0.41
C9orf3-201ENST00000277198 SMG9Q9H0W8 520 aaKnown RBP12.51□□□□□ -0.41
C9orf3-201ENST00000277198 HMG20AQ9NP66 347 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 AASDHPPTQ9NRN7 309 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 SLC6A13Q9NSD5 602 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 ABCB8Q9NUT2 735 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 KIAA1522Q9P206 1035 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-201ENST00000277198 DLGAP4Q9Y2H0 992 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 A0A1W2PQ67 120 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 PABPN1LA6NDY0 278 aaKnown RBP12.5□□□□□ -0.41
C9orf3-201ENST00000277198 CLDN25C9JDP6 229 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 ANGPTL1O95841 491 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 PORP16435 677 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-201ENST00000277198 GPX2P18283 190 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 SDC1P18827 310 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 HTR1BP28222 390 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 GABRR2P28476 465 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 DNAJA1P31689 397 aaKnown RBP12.5□□□□□ -0.41
C9orf3-201ENST00000277198 KIR3DL1P43629 444 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 CSNK2BP67870 215 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 NR1D2Q14995 579 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 CTF1Q16619 201 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 KDM4DQ6B0I6 523 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 NIPAL1Q6NVV3 410 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 GALNT18Q6P9A2 607 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 USP45Q70EL2 814 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 UBE2R2Q712K3 238 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-201ENST00000277198 CENPSQ8N2Z9 138 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 PARP8Q8N3A8 854 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 CPA6Q8N4T0 437 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 SLC15A4Q8N697 577 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 PAF1Q8N7H5 531 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 ABHD11Q8NFV4 315 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 OR2AP1Q8NGE2 309 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 FRS2Q8WU20 508 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 ASB11Q8WXH4 323 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 NELL1Q92832 810 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 ASB16Q96NS5 453 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 THG1LQ9NWX6 298 aaKnown RBP12.5□□□□□ -0.41
C9orf3-201ENST00000277198 GIN1Q9NXP7 522 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 SCN3BQ9NY72 215 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 UTS2RQ9UKP6 389 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 MAPRE3Q9UPY8 281 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 COQ6Q9Y2Z9 468 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 SMAD6O43541 496 aaKnown RBP12.5□□□□□ -0.41
C9orf3-201ENST00000277198 JRKO75564 520 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 SEMG1P04279 462 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 FPR1P21462 350 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 AGXTP21549 392 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 AOAHP28039 575 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 GP2P55259 537 aaKnown RBP12.5□□□□□ -0.41
C9orf3-201ENST00000277198 EMX1Q04741 257 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-201ENST00000277198 VEZF1Q14119 521 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 DUOXA1Q1HG43 343 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 VMACQ2NL98 169 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 PLEKHS1Q5SXH7 462 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 CRTC1Q6UUV9 634 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 PIWIL3Q7Z3Z3 882 aaKnown RBP12.5□□□□□ -0.41
C9orf3-201ENST00000277198 TSPYL5Q86VY4 417 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-201ENST00000277198 APCDD1Q8J025 514 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 MINDY2Q8NBR6 621 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 GPR26Q8NDV2 337 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 RORBQ92753 470 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 ECHDC3Q96DC8 303 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 SH3YL1Q96HL8 342 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-201ENST00000277198 LRRC3BQ96PB8 259 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 GDE1Q9NZC3 331 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 LSM7Q9UK45 103 aaKnown RBP12.5□□□□□ -0.41
C9orf3-201ENST00000277198 FBXL21Q9UKT6 434 aa12.5□□□□□ -0.41
C9orf3-201ENST00000277198 GFYI3L273 518 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 KPNA4O00629 521 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-201ENST00000277198 ZNF197O14709 1029 aa12.49□□□□□ -0.41
C9orf3-201ENST00000277198 PI15O43692 258 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms