RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 PLPP4Q5VZY2 271 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 GPR153Q6NV75 609 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 SPRED2Q7Z698 418 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 CACUL1Q86Y37 369 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 ZZZ3Q8IYH5 903 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 SYTL1Q8IYJ3 562 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 HUS1BQ8NHY5 278 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 HHIPL1Q96JK4 782 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 ACAT2Q9BWD1 397 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 RUBCNLQ9H714 662 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 TMEM184CQ9NVA4 438 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 LMCD1Q9NZU5 365 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 STOX2Q9P2F5 926 aaPredicted RBP10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 ACSL6Q9UKU0 697 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 SAMD4AQ9UPU9 718 aaKnown RBP10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 GMPPBQ9Y5P6 360 aa10.47□□□□□ -0.73
PRUNE1-201ENST00000271620 MYO9BQ13459 2157 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 TRANK1O15050 2925 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 PLXNB3Q9ULL4 1909 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 CFAP99D6REC4 459 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 BOLA2-SMG1P6H3BVE0 249 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 KPNA3O00505 521 aaPredicted RBP10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 FKTNO75072 461 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 TGFB1P01137 390 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 LAG3P18627 525 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 PSMB9P28065 219 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 CRATP43155 626 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 CCR3P51677 355 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 ARHGDIAP52565 204 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 TMBIM6P55061 237 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 WDR5P61964 334 aaKnown RBP10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 RPS13P62277 151 aaKnown RBP10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 POLR2LP62875 67 aaKnown RBP10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 GBX1Q14549 363 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 NPTX1Q15818 432 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 SMU1Q2TAY7 513 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 TMEM220Q6QAJ8 160 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 SLC16A12Q6ZSM3 486 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 HIPK1Q86Z02 1210 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 NAGSQ8N159 534 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 TTC29Q8NA56 475 aaPredicted RBP10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 ZNF540Q8NDQ6 660 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 WDR20Q8TBZ3 569 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 CSGALNACT1Q8TDX6 532 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 RAB2BQ8WUD1 216 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 IRF7Q92985 503 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 FKBP10Q96AY3 582 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 DUSP26Q9BV47 211 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 RAD21L1Q9H4I0 556 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 TBC1D23Q9NUY8 699 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 USE1Q9NZ43 259 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 BLOC1S6Q9UL45 172 aa10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 PNMA8BQ9ULN7 279 aaPredicted RBP10.46□□□□□ -0.73
PRUNE1-201ENST00000271620 COL4A6Q14031 1691 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 LILRB3O75022 631 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 PCMT1P22061 227 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 MAPK1P28482 360 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 IMPA1P29218 277 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 PHEXP78562 749 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 COL9A2Q14055 689 aaPredicted RBP10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 NR1D2Q14995 579 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 ZNF829Q3KNS6 432 aaPredicted RBP10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 GGTA1PQ4G0N0 100 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 COX20Q5RI15 118 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 SHQ1Q6PI26 577 aaKnown RBP10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 ANKRD33Q7Z3H0 272 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 CCDC71Q8IV32 467 aaPredicted RBP10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 ELMOD1Q8N336 334 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 OR7G3Q8NG95 312 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 NDNFQ8TB73 568 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 SPPL2AQ8TCT8 520 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 RPL3LQ92901 407 aaKnown RBP10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 AP2M1Q96CW1 435 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 ZNF641Q96N77 438 aaPredicted RBP10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 PKP4Q99569 1192 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 TCF25Q9BQ70 676 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 TUBA1CQ9BQE3 449 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 CPEB1Q9BZB8 566 aaKnown RBP10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 OR51B5Q9H339 312 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 TDP1Q9NUW8 608 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 THUMPD1Q9NXG2 353 aaKnown RBP10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 PPIL1Q9Y3C6 166 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 TESMINQ9Y4I5 508 aa10.46□□□□□ -0.74
PRUNE1-201ENST00000271620 MGAT4DA6NG13 374 aa10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 M0R129 80 aa10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 NDUFS2O75306 463 aa10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 VIPP01282 170 aa10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 INHBBP09529 407 aa10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 CCL5P13501 91 aa10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 POU2F1P14859 743 aa10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 TIMP2P16035 220 aa10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 HOXA9P31269 272 aa10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 OPRL1P41146 370 aa10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 RAE1P78406 368 aaKnown RBP10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 GRSF1Q12849 480 aaKnown RBP eCLIP10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 TMEM115Q12893 351 aaPredicted RBP10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 PLEKHS1Q5SXH7 462 aa10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 CPTPQ5TA50 214 aa10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 AHSA2Q719I0 299 aa10.45□□□□□ -0.74
PRUNE1-201ENST00000271620 SERPINA11Q86U17 422 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms