RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 KIAA1958Q8N8K9 716 aa16.89■□□□□ 0.3
TRAM1-201ENST00000262213 MTERF1Q99551 399 aaKnown RBP16.89■□□□□ 0.3
TRAM1-201ENST00000262213 NEK6Q9HC98 313 aa16.89■□□□□ 0.3
TRAM1-201ENST00000262213 ERVK13-1Q9NX77 482 aa16.89■□□□□ 0.3
TRAM1-201ENST00000262213 PSORS1C1Q9UIG5 152 aa16.89■□□□□ 0.3
TRAM1-201ENST00000262213 A8MV72 311 aaPredicted RBP16.89■□□□□ 0.29
TRAM1-201ENST00000262213 TAF4O00268 1085 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 SMAD6O43541 496 aaKnown RBP16.89■□□□□ 0.29
TRAM1-201ENST00000262213 DYRK3O43781 588 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 CYP7B1O75881 506 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 ZDHHC11BP0C7U3 371 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 LAMP1P11279 417 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 S100A1P23297 94 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 HNF1BP35680 557 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 CCDC80Q76M96 950 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 MYDGFQ969H8 173 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 TESCQ96BS2 214 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 SIGLEC11Q96RL6 698 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 SLC6A14Q9UN76 642 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 NOX1Q9Y5S8 564 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 FAM47E-STBD1D6RA91 191 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 GFRA2O00451 464 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 PRAMEF4O60810 478 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 SEMG1P04279 462 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 ACPPP15309 386 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 AMD1P17707 334 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 RPS3P23396 243 aaKnown RBP eCLIP16.89■□□□□ 0.298e-23■□□□□ 10
TRAM1-201ENST00000262213 DMPKQ09013 629 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 KCNA10Q16322 511 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 PRAMEF9Q5VWM5 478 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 PNCKQ6P2M8 343 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 NEK5Q6P3R8 708 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 TAS1R1Q7RTX1 841 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 SLC46A3Q7Z3Q1 461 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 ELMOD1Q8N336 334 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 SLC5A8Q8N695 610 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 UBTD2Q8WUN7 234 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 CMTM7Q96FZ5 175 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 HRASLS5Q96KN8 279 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 PITX2Q99697 317 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 NDEL1Q9GZM8 345 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 EHD3Q9NZN3 535 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 FZD4Q9ULV1 537 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 BTBD3Q9Y2F9 522 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 IFT52Q9Y366 437 aa16.89■□□□□ 0.29
TRAM1-201ENST00000262213 TNFRSF11BO00300 401 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 SYN3O14994 580 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 ADAM12O43184 909 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 SUV39H1O43463 412 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 FZD6O60353 706 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 MAPK1P28482 360 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 BOP1Q14137 746 aaKnown RBP16.88■□□□□ 0.29
TRAM1-201ENST00000262213 GATAD2AQ86YP4 633 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 DNAJC22Q8N4W6 341 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 LINC01599Q8WXQ3 324 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 NUAK2Q9H093 628 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 RNF38Q9H0F5 515 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 TPT1P8Q9HAU6 139 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 RAPGEFL1Q9UHV5 662 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 MBD1Q9UIS9 605 aaPredicted RBP16.88■□□□□ 0.29
TRAM1-201ENST00000262213 PCDHGB6Q9Y5F9 930 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 OR6C75A6NL08 312 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 MED26O95402 600 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 CDK1P06493 297 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 ADORA3P0DMS8 318 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 UGT2B10P36537 528 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 ST3GAL4Q11206 333 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 GPR17Q13304 367 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 DMC1Q14565 340 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 HECTD3Q5T447 861 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 ADGRF1Q5T601 910 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 RFLNAQ6ZTI6 216 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 ZNF605Q86T29 641 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 TCAIMQ8N3R3 496 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 CHCHD4Q8N4Q1 142 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 WFDC5Q8TCV5 224 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 FCGR1BQ92637 280 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 TBC1D20Q96BZ9 403 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 ANKHQ9HCJ1 492 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 DDX28Q9NUL7 540 aaKnown RBP16.88■□□□□ 0.29
TRAM1-201ENST00000262213 SPASTQ9UBP0 616 aa16.88■□□□□ 0.29
TRAM1-201ENST00000262213 CLCA1A8K7I4 914 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 CTDSP2O14595 271 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 HAT1O14929 419 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 MFN2O95140 757 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 KRT8P05787 483 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 CCR7P32248 378 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 CSKP41240 450 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 CDH12P55289 794 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 WNT3P56703 355 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 CHIT1Q13231 466 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 MED22Q15528 200 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 SLC24A5Q71RS6 500 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 FAM124AQ86V42 546 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 OR8H2Q8N162 312 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 KBTBD8Q8NFY9 601 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 C2orf78A6NCI8 922 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 KMOO15229 486 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 PTTG1O95997 202 aa16.87■□□□□ 0.29
TRAM1-201ENST00000262213 GPX2P18283 190 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms