RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 DNAJC22Q8N4W6 341 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 MYDGFQ969H8 173 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 SUSD3Q96L08 255 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 FYTTD1Q96QD9 318 aaKnown RBP15.4■□□□□ 0.06
LMNB1-201ENST00000261366 NIPSNAP1Q9BPW8 284 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 ADGRE3Q9BY15 652 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 GABARAPL1Q9H0R8 117 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 P2RY12Q9H244 342 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 IMPAD1Q9NX62 359 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 MS4A12Q9NXJ0 267 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 RAPGEFL1Q9UHV5 662 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 FCF1Q9Y324 198 aaKnown RBP15.4■□□□□ 0.06
LMNB1-201ENST00000261366 CLCA1A8K7I4 914 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 H3BQ06 376 aaPredicted RBP15.4■□□□□ 0.06
LMNB1-201ENST00000261366 KRT6AP02538 564 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 C9P02748 559 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 CSF2P04141 144 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 KRT6BP04259 564 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 CDK1P06493 297 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 RHOCP08134 193 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 HOXD11P31277 338 aaPredicted RBP15.4■□□□□ 0.06
LMNB1-201ENST00000261366 KRT6CP48668 564 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 CDH12P55289 794 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 CLDN8P56748 225 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 CCDC58Q4VC31 144 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 LRIF1Q5T3J3 769 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 OR9Q2Q8NGE9 314 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 DHRS1Q96LJ7 313 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 CRISPLD1Q9H336 500 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 MUTYHQ9UIF7 546 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 TBC1D24Q9ULP9 559 aa15.4■□□□□ 0.06
LMNB1-201ENST00000261366 DNMT3AQ9Y6K1 912 aaPredicted RBP15.4■□□□□ 0.06
LMNB1-201ENST00000261366 FHP07954 510 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 ADRA2AP08913 450 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 COX7A2P14406 83 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 SOX6P35712 828 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 MAPKAPK2P49137 400 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 ZNF544Q6NX49 715 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 ZNF517Q6ZMY9 492 aaPredicted RBP15.39■□□□□ 0.05
LMNB1-201ENST00000261366 TRIM46Q7Z4K8 759 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 PTOV1Q86YD1 416 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 SYT12Q8IV01 421 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 BEND7Q8N7W2 519 aaPredicted RBP15.39■□□□□ 0.05
LMNB1-201ENST00000261366 OR52E4Q8NGH9 312 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 FATE1Q969F0 183 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 SH3KBP1Q96B97 665 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 OR2B2Q9GZK3 357 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 GKN1Q9NS71 199 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 RPS6KA6Q9UK32 745 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 DUSP12Q9UNI6 340 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 ERVW-1Q9UQF0 538 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 PEX16Q9Y5Y5 336 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 LYVE1Q9Y5Y7 322 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 PATJQ8NI35 1801 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 MAGEB17A8MXT2 336 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 TNFRSF11BO00300 401 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 BNIP3LO60238 219 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 CKMT1AP12532 417 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 TNFSF8P32971 234 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 UGT2B10P36537 528 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 CLCN4P51793 760 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 PRKCDQ05655 676 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 RNF219Q5W0B1 726 aaPredicted RBP15.39■□□□□ 0.05
LMNB1-201ENST00000261366 TUBA3EQ6PEY2 450 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 C17orf99Q6UX52 265 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 TRIM48Q8IWZ4 208 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 DEPDC4Q8N2C3 294 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 GPR151Q8TDV0 419 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 UBASH3BQ8TF42 649 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 NELL1Q92832 810 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 HRASLS5Q96KN8 279 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 CITED4Q96RK1 184 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 SIGLEC11Q96RL6 698 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 MTERF1Q99551 399 aaKnown RBP15.39■□□□□ 0.05
LMNB1-201ENST00000261366 CCM2Q9BSQ5 444 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 ATG10Q9H0Y0 220 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 NMRK2Q9NPI5 230 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 RIMKLBQ9ULI2 386 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 KLHL20Q9Y2M5 609 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 OARD1Q9Y530 152 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 GREB1Q4ZG55 1949 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 GBF1Q92538 1859 aa15.39■□□□□ 0.05
LMNB1-201ENST00000261366 PNMA8CA0A1B0GUJ8 204 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 J3KTA2 159 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 RGS13O14921 159 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 YY2O15391 372 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 ZNF7P17097 686 aaPredicted RBP15.38■□□□□ 0.05
LMNB1-201ENST00000261366 CTGFP29279 349 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 SOX3P41225 446 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 CD83Q01151 205 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 CACNG1Q06432 222 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 TBCEQ15813 527 aaPredicted RBP15.38■□□□□ 0.05
LMNB1-201ENST00000261366 SLC30A2Q9BRI3 323 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 KATNAL1Q9BW62 490 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 SNTG1Q9NSN8 517 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 RHCGQ9UBD6 479 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 PIKFYVEQ9Y2I7 2098 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 WDR47O94967 919 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 SPIBQ01892 262 aa15.38■□□□□ 0.05
LMNB1-201ENST00000261366 GANABQ14697 944 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms