RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 RPS3P23396 243 aaKnown RBP eCLIP11.3□□□□□ -0.6
VRTN-201ENST00000256362 GRK5P34947 590 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 SOX3P41225 446 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 P2RX3P56373 397 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 STARD3Q14849 445 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 OR4F3Q6IEY1 312 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 EIF3MQ7L2H7 374 aaKnown RBP11.3□□□□□ -0.6
VRTN-201ENST00000256362 COQ8BQ96D53 544 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 PYURFQ96I23 114 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 ZNF556Q9HAH1 456 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 OLA1Q9NTK5 396 aaKnown RBP11.3□□□□□ -0.6
VRTN-201ENST00000256362 AGO1Q9UL18 857 aaKnown RBP11.3□□□□□ -0.6
VRTN-201ENST00000256362 CLEC4AQ9UMR7 237 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 LYVE1Q9Y5Y7 322 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 METTL15A6NJ78 407 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 H3BN98 237 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 PCDHGA12O60330 932 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 ALX3O95076 343 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 PTHP01270 115 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 MYL9P24844 172 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 TNFSF8P32971 234 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 HTR3AP46098 478 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 PPP3CCP48454 512 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 ZNF140P52738 457 aaPredicted RBP11.3□□□□□ -0.6
VRTN-201ENST00000256362 GABARAPL2P60520 117 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 SPIBQ01892 262 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 SF1Q15637 639 aaKnown RBP11.3□□□□□ -0.6
VRTN-201ENST00000256362 LRRC73Q5JTD7 316 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 PNCKQ6P2M8 343 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 GLB1LQ6UWU2 654 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 NOXA1Q86UR1 476 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 LAX1Q8IWV1 398 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 IQCF2Q8IXL9 164 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 RIMKLAQ8IXN7 391 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 TMEM132CQ8N3T6 1108 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 OR6C4Q8NGE1 309 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 OR6F1Q8NGZ6 308 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 DEDD2Q8WXF8 326 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 MYDGFQ969H8 173 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 MAL2Q969L2 176 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 CCM2Q9BSQ5 444 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 BEX1Q9HBH7 125 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 FBXO8Q9NRD0 319 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 FCF1Q9Y324 198 aaKnown RBP11.3□□□□□ -0.6
VRTN-201ENST00000256362 PCDHB5Q9Y5E4 795 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 USP34Q70CQ2 3546 aa11.3□□□□□ -0.6
VRTN-201ENST00000256362 A0A0U1RQF3 1178 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 FAM240BA0A1B0GVZ2 78 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 M0QZQ0 153 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 FABP3P05413 133 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 IL7P13232 177 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 LPOP22079 712 aaPredicted RBP11.29□□□□□ -0.6
VRTN-201ENST00000256362 FEN1P39748 380 aaKnown RBP11.29□□□□□ -0.6
VRTN-201ENST00000256362 SLC35A2P78381 396 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 CAMK2GQ13555 558 aaPredicted RBP11.29□□□□□ -0.6
VRTN-201ENST00000256362 UGT8Q16880 541 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 XKR7Q5GH72 579 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 NLRP8Q86W28 1048 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 STK40Q8N2I9 435 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 NKAPQ8N5F7 415 aaKnown RBP11.29□□□□□ -0.6
VRTN-201ENST00000256362 IL17RDQ8NFM7 739 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 LKAAEAR1Q8TD35 194 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 C1orf74Q96LT6 269 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 HDHD2Q9H0R4 259 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 FBXO44Q9H4M3 255 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 CCNB1IP1Q9NPC3 277 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 SCML2Q9UQR0 700 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
VRTN-201ENST00000256362 FABP12A6NFH5 140 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 K7ERQ8 282 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 OR7A17O14581 309 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 SERPINI2O75830 405 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 EPN2O95208 641 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 SOX14O95416 240 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 OGNP20774 298 aaKnown RBP11.29□□□□□ -0.6
VRTN-201ENST00000256362 HOXD9P28356 352 aaPredicted RBP11.29□□□□□ -0.6
VRTN-201ENST00000256362 RRM2P31350 389 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 CAV3P56539 151 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 MAD2L1BPQ15013 274 aaPredicted RBP11.29□□□□□ -0.6
VRTN-201ENST00000256362 ZMYND11Q15326 602 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 KIAA1614Q5VZ46 1190 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 MFSD14CQ5VZR4 134 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 PTRH1Q86Y79 214 aaKnown RBP11.29□□□□□ -0.6
VRTN-201ENST00000256362 PAPD5Q8NDF8 572 aaKnown RBP11.29□□□□□ -0.6
VRTN-201ENST00000256362 TRPV1Q8NER1 839 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 SELENOMQ8WWX9 145 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 CNDP2Q96KP4 475 aaKnown RBP11.29□□□□□ -0.6
VRTN-201ENST00000256362 OR5M11Q96RB7 305 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 ASPNQ9BXN1 380 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 NLE1Q9NVX2 485 aaPredicted RBP11.29□□□□□ -0.6
VRTN-201ENST00000256362 SH3BP4Q9P0V3 963 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 C5orf42Q9H799 3197 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 INSIG1O15503 277 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 OR2B3O76000 313 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 RHOCP08134 193 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 PARP15Q460N3 678 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 RNF219Q5W0B1 726 aaPredicted RBP11.29□□□□□ -0.6
VRTN-201ENST00000256362 TEX26Q8N6G2 289 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 GRPEL2Q8TAA5 225 aa11.29□□□□□ -0.6
VRTN-201ENST00000256362 HSH2DQ96JZ2 352 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms