RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CPA6Q8N4T0 437 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 COL21A1Q96P44 957 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 RUBCNLQ9H714 662 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 IL26Q9NPH9 171 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 LHX3Q9UBR4 397 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 SCN10AQ9Y5Y9 1956 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 PNMA8CA0A1B0GUJ8 204 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 UPK3BL1B0FP48 263 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 UPK3BL2E5RIL1 263 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 AOC2O75106 756 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 CPSF4O95639 269 aaKnown RBP15.01□□□□□ -0.01
DDX55-201ENST00000238146 KLKB1P03952 638 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 NUDT7P0C024 238 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 AMD1P17707 334 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 HTR3AP46098 478 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 RPIAP49247 311 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 CYP4F2P78329 520 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 ABRQ12979 859 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 NOXRED1Q6NXP6 359 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 NEK5Q6P3R8 708 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 ADGRG2Q8IZP9 1017 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 CLECL1Q8IZS7 167 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 EBPLQ9BY08 206 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 CEP44Q9C0F1 390 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 OR2B2Q9GZK3 357 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 C14orf119Q9NWQ9 140 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 ARL15Q9NXU5 204 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 DNMT3LQ9UJW3 386 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 ZNF221Q9UK13 617 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 LYVE1Q9Y5Y7 322 aa15.01□□□□□ -0.01
DDX55-201ENST00000238146 PDZK1P1A8MUH7 402 aa15□□□□□ -0.01
DDX55-201ENST00000238146 TMEM189-UBE2V1I3L0A0 370 aa15□□□□□ -0.01
DDX55-201ENST00000238146 VNN2O95498 520 aa15□□□□□ -0.01
DDX55-201ENST00000238146 ACRV1P26436 265 aa15□□□□□ -0.01
DDX55-201ENST00000238146 IDH2P48735 452 aaKnown RBP15□□□□□ -0.01
DDX55-201ENST00000238146 PXNP49023 591 aaPredicted RBP15□□□□□ -0.01
DDX55-201ENST00000238146 OR2B6P58173 313 aa15□□□□□ -0.01
DDX55-201ENST00000238146 VEZF1Q14119 521 aa15□□□□□ -0.01
DDX55-201ENST00000238146 ATXN7L2Q5T6C5 722 aaPredicted RBP15□□□□□ -0.01
DDX55-201ENST00000238146 GLB1LQ6UWU2 654 aa15□□□□□ -0.01
DDX55-201ENST00000238146 HOMEZQ8IX15 550 aa15□□□□□ -0.01
DDX55-201ENST00000238146 RAVER1Q8IY67 606 aaKnown RBP15□□□□□ -0.01
DDX55-201ENST00000238146 SYNPOQ8N3V7 929 aa15□□□□□ -0.01
DDX55-201ENST00000238146 ZNF226Q9NYT6 803 aa15□□□□□ -0.01
DDX55-201ENST00000238146 MTMR11A4FU01 709 aa15□□□□□ -0.01
DDX55-201ENST00000238146 TMEM229AB2RXF0 380 aa15□□□□□ -0.01
DDX55-201ENST00000238146 CTDSP2O14595 271 aa15□□□□□ -0.01
DDX55-201ENST00000238146 YY2O15391 372 aa15□□□□□ -0.01
DDX55-201ENST00000238146 GJB5O95377 273 aa15□□□□□ -0.01
DDX55-201ENST00000238146 HSMCR30P0CW71 290 aa15□□□□□ -0.01
DDX55-201ENST00000238146 ITGALP20701 1170 aa15□□□□□ -0.01
DDX55-201ENST00000238146 PRPS1L1P21108 318 aa15□□□□□ -0.01
DDX55-201ENST00000238146 ATP5C1P36542 298 aaKnown RBP15□□□□□ -0.01
DDX55-201ENST00000238146 PIK3CBP42338 1070 aa15□□□□□ -0.01
DDX55-201ENST00000238146 ST3GAL4Q11206 333 aa15□□□□□ -0.01
DDX55-201ENST00000238146 BOP1Q14137 746 aaKnown RBP15□□□□□ -0.01
DDX55-201ENST00000238146 CLPPQ16740 277 aaPredicted RBP15□□□□□ -0.01
DDX55-201ENST00000238146 ATAD3CQ5T2N8 411 aa15□□□□□ -0.01
DDX55-201ENST00000238146 C10orf62Q5T681 223 aaPredicted RBP15□□□□□ -0.01
DDX55-201ENST00000238146 CXorf57Q6NSI4 855 aaKnown RBP15□□□□□ -0.01
DDX55-201ENST00000238146 MACC1Q6ZN28 852 aa15□□□□□ -0.01
DDX55-201ENST00000238146 STX19Q8N4C7 294 aa15□□□□□ -0.01
DDX55-201ENST00000238146 RNF175Q8N4F7 328 aa15□□□□□ -0.01
DDX55-201ENST00000238146 SLC5A8Q8N695 610 aa15□□□□□ -0.01
DDX55-201ENST00000238146 PSD4Q8NDX1 1056 aa15□□□□□ -0.01
DDX55-201ENST00000238146 PIH1D2Q8WWB5 315 aa15□□□□□ -0.01
DDX55-201ENST00000238146 NPAP1Q9NZP6 1156 aa15□□□□□ -0.01
DDX55-201ENST00000238146 KLK4Q9Y5K2 254 aa15□□□□□ -0.01
DDX55-201ENST00000238146 PIKFYVEQ9Y2I7 2098 aa15□□□□□ -0.01
DDX55-201ENST00000238146 TRBV5-4A0A0C4DH59 114 aa15□□□□□ -0.01
DDX55-201ENST00000238146 FAM172BPA6NC97 362 aa15□□□□□ -0.01
DDX55-201ENST00000238146 GABRB1P18505 474 aa15□□□□□ -0.01
DDX55-201ENST00000238146 AQP1P29972 269 aa15□□□□□ -0.01
DDX55-201ENST00000238146 GGTA1PQ4G0N0 100 aa15□□□□□ -0.01
DDX55-201ENST00000238146 CLLU1OSQ5K130 101 aa15□□□□□ -0.01
DDX55-201ENST00000238146 NXNL2Q5VZ03 156 aa15□□□□□ -0.01
DDX55-201ENST00000238146 UBQLNLQ8IYU4 475 aa15□□□□□ -0.01
DDX55-201ENST00000238146 TCAIMQ8N3R3 496 aa15□□□□□ -0.01
DDX55-201ENST00000238146 SPATA17Q96L03 361 aa15□□□□□ -0.01
DDX55-201ENST00000238146 TPT1P8Q9HAU6 139 aa15□□□□□ -0.01
DDX55-201ENST00000238146 ZFYVE1Q9HBF4 777 aa15□□□□□ -0.01
DDX55-201ENST00000238146 RLIMQ9NVW2 624 aa15□□□□□ -0.01
DDX55-201ENST00000238146 ERVK13-1Q9NX77 482 aa15□□□□□ -0.01
DDX55-201ENST00000238146 AFF4Q9UHB7 1163 aaKnown RBP15□□□□□ -0.01
DDX55-201ENST00000238146 A0A1B0GVM2 712 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 LOC110117498-PIK3R3F6TDL0 507 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 H3BQ06 376 aaPredicted RBP14.99□□□□□ -0.01
DDX55-201ENST00000238146 HOXC11O43248 304 aaPredicted RBP14.99□□□□□ -0.01
DDX55-201ENST00000238146 SUV39H1O43463 412 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 KIAA0513O60268 411 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 PRAMEF4O60810 478 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 SLC15A1P46059 708 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 SRSF11Q05519 484 aaKnown RBP14.99□□□□□ -0.01
DDX55-201ENST00000238146 IRF3Q14653 427 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 LRRC26Q2I0M4 334 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 BCL7AQ4VC05 210 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 PRAMEF9Q5VWM5 478 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 ZNF544Q6NX49 715 aa14.99□□□□□ -0.01
DDX55-201ENST00000238146 RSPO2Q6UXX9 243 aaPredicted RBP14.99□□□□□ -0.01
DDX55-201ENST00000238146 ZNF605Q86T29 641 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms