RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 C14orf119Q9NWQ9 140 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 ACP5P13686 325 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 EPCAMP16422 314 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 NR4A2P43354 598 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 SULT2A1Q06520 285 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 LRRC32Q14392 662 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 DCBLD1Q8N8Z6 715 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 ZC3HAV1LQ96H79 300 aaKnown RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 SYT17Q9BSW7 474 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 ERVK-6Q9BXR3 956 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 MEIS2O14770 477 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 FAM155BO75949 473 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 PNPP00491 289 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 ITGA5P08648 1049 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 ABHD2P08910 425 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 HOXB2P14652 356 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 PORP16435 677 aaPredicted RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 ZNF182P17025 639 aaPredicted RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 ATXN7L2Q5T6C5 722 aaPredicted RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 CDKAL1Q5VV42 579 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 SPATA19Q7Z5L4 167 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 SCGB3A2Q96PL1 93 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 ZNF490Q9ULM2 529 aaPredicted RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 A0A1W2PPW3 197 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 PSMD10O75832 226 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 IFNW1P05000 195 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 RFX5P48382 616 aaPredicted RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 CLCN5P51795 746 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 TSGA10IPQ3SY00 556 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 FIP1L1Q6UN15 594 aaKnown RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 CAND1Q86VP6 1230 aaKnown RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 ANKRD46Q86W74 232 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 NPLOC4Q8TAT6 608 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 ZNF606Q8WXB4 792 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 TAS2R9Q9NYW1 312 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 PCYOX1Q9UHG3 505 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 RUVBL1Q9Y265 456 aaKnown RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 PRR36Q9H6K5 1346 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 KDELR1P24390 212 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 ZNF143P52747 638 aaPredicted RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 CLRN1P58418 232 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 KLF1Q13351 362 aaPredicted RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 ZNF404Q494X3 552 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 GPR157Q5UAW9 335 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 NKX2-4Q9H2Z4 354 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 FBRSL1Q9HCM7 1045 aaKnown RBP10.83□□□□□ -0.68
MSH6-201ENST00000234420 DNAJB11Q9UBS4 358 aa10.83□□□□□ -0.68
MSH6-201ENST00000234420 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.82□□□□□ -0.68
MSH6-201ENST00000234420 CDK14O94921 469 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 CD72P21854 359 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 SLC26A2P50443 739 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 CLEC6AQ6EIG7 209 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 TPRG1Q6ZUI0 275 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 DAGLBQ8NCG7 672 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 TGM7Q96PF1 710 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ITPAQ9BY32 194 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 TAS2R10Q9NYW0 307 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ARHGEF40Q8TER5 1519 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ENTPD6O75354 484 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 RHOP08100 348 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ANXA3P12429 323 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 MYCLP1P12525 358 aaPredicted RBP10.82□□□□□ -0.68
MSH6-201ENST00000234420 FASLGP48023 281 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 PTPRNQ16849 979 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 GCNT6Q5T4J0 391 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 COX18Q8N8Q8 333 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 DTX3Q8N9I9 347 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ZFAND2BQ8WV99 257 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 DEDD2Q8WXF8 326 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 UPF1Q92900 1129 aaKnown RBP eCLIP10.82□□□□□ -0.68
MSH6-201ENST00000234420 RHBDF1Q96CC6 855 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ISCA1Q9BUE6 129 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 TRIM36Q9NQ86 728 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 MGAT4CQ9UBM8 478 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 NKX1-2Q9UD57 310 aaPredicted RBP10.82□□□□□ -0.68
MSH6-201ENST00000234420 TIMM22Q9Y584 194 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 TCRBV9S1A1TA0A576 114 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 NDUFS4O43181 175 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 CKMT2P17540 419 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ANTXR2P58335 489 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ACTR1AP61163 376 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 RAB30Q15771 203 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ZNF425Q6IV72 752 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 KIAA1211LQ6NV74 962 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 IFNL1Q8IU54 200 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 OR4E2Q8NGC2 313 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 PCDHAC1Q9H158 963 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 CDK5RAP2Q96SN8 1893 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 TISP43B9A030 160 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 ADAMDEC1O15204 470 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 RGS9O75916 674 aaPredicted RBP10.82□□□□□ -0.68
MSH6-201ENST00000234420 SLC35G6P0C7Q6 338 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 LAMP2P13473 410 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 CRHR2Q13324 411 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 GPR68Q15743 365 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 EOGTQ5NDL2 527 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 TMEM145Q8NBT3 493 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 SMARCD2Q92925 531 aa10.82□□□□□ -0.68
MSH6-201ENST00000234420 SH3YL1Q96HL8 342 aaPredicted RBP10.82□□□□□ -0.68
MSH6-201ENST00000234420 HSFY1Q96LI6 401 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms