RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 LALBAP00709 142 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 SLC10A3P09131 477 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 LTA4HP09960 611 aaKnown RBP12.63□□□□□ -0.39
MSH2-201ENST00000233146 TPH1P17752 444 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 IL1RNP18510 177 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 AIF1P55008 147 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 BTG1P62324 171 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 HERVK_113P63132 956 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 POU4F1Q01851 419 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 NPRL3Q12980 569 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 BHLHB9Q6PI77 547 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 PGBD3Q8N328 593 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 ZNF565Q8N9K5 539 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 NETO2Q8NC67 525 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 OR11H7Q8NGC8 314 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 OR6S1Q8NH40 331 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 NANPQ8TBE9 248 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 HGDQ93099 445 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 KCNA7Q96RP8 456 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 MGLLQ99685 303 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 MED28Q9H204 178 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 MID1IP1Q9NPA3 183 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 BTG4Q9NY30 223 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 NDRG3Q9UGV2 375 aa12.63□□□□□ -0.39
MSH2-201ENST00000233146 ZNF490Q9ULM2 529 aaPredicted RBP12.63□□□□□ -0.39
MSH2-201ENST00000233146 COL11A2P13942 1736 aaPredicted RBP12.63□□□□□ -0.39
MSH2-201ENST00000233146 BPTFQ12830 3046 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 FAM74A7A6NL05 159 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 CXCR6O00574 342 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 ACKR2O00590 384 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 MFSD11O43934 449 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 HPGDSO60760 199 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 FGF2P09038 288 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 BAG6P46379 1132 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 ZNF284Q2VY69 593 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 FAM74A3Q4VXF1 159 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 CDKL4Q5MAI5 379 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 ALG1LQ6GMV1 187 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 ZFAND4Q86XD8 727 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 NSMAFQ92636 917 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 UCN3Q969E3 161 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 GMCL1Q96IK5 515 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 HRASLS5Q96KN8 279 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 OR5M11Q96RB7 305 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 APOL5Q9BWW9 433 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 CDHR5Q9HBB8 845 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 SLAMF7Q9NQ25 335 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 PRDM9Q9NQV7 894 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 GPR83Q9NYM4 423 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 ZIM2Q9NZV7 527 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 DERAQ9Y315 318 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 PCDHGB7Q9Y5F8 929 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 DNMT3AQ9Y6K1 912 aaPredicted RBP12.62□□□□□ -0.39
MSH2-201ENST00000233146 A0A1W2PQL4 384 aaPredicted RBP12.62□□□□□ -0.39
MSH2-201ENST00000233146 TRABD2BA6NFA1 517 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 ARNTLO00327 626 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 CPB1P15086 417 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 PTPRAP18433 802 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 MAGEA2P43356 314 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 GSTM5P46439 218 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 RELQ04864 619 aaPredicted RBP12.62□□□□□ -0.39
MSH2-201ENST00000233146 EIF4HQ15056 248 aaKnown RBP12.62□□□□□ -0.39
MSH2-201ENST00000233146 MANEALQ5VSG8 457 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 IL31Q6EBC2 164 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 MACC1Q6ZN28 852 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 CREB3L4Q8TEY5 395 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 CCDC17Q96LX7 622 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 MSTO1Q9BUK6 570 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 ERVK-6Q9BXR3 956 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 BIN3Q9NQY0 253 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 NCKAP1Q9Y2A7 1128 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 LOC102723532A0A0G2JNH3 316 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 M0QYV0 167 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 HOXB6P17509 224 aaKnown RBP12.62□□□□□ -0.39
MSH2-201ENST00000233146 CTPS1P17812 591 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 TGFB2P61812 414 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 XRRA1Q6P2D8 792 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 GPR149Q86SP6 731 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 PROKR1Q8TCW9 393 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 ZNF436Q9C0F3 470 aaPredicted RBP12.62□□□□□ -0.39
MSH2-201ENST00000233146 SLC28A3Q9HAS3 691 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 KRT84Q9NSB2 600 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 TMEM45AQ9NWC5 275 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 MLXQ9UH92 298 aa12.62□□□□□ -0.39
MSH2-201ENST00000233146 MIA3Q5JRA6 1907 aa12.61□□□□□ -0.39
MSH2-201ENST00000233146 RRN3P2A6NIE6 340 aa12.61□□□□□ -0.39
MSH2-201ENST00000233146 CD3EAPO15446 510 aaKnown RBP12.61□□□□□ -0.39
MSH2-201ENST00000233146 AKAP8O43823 692 aaKnown RBP12.61□□□□□ -0.39
MSH2-201ENST00000233146 LGI1O95970 557 aa12.61□□□□□ -0.39
MSH2-201ENST00000233146 SLURP2P0DP57 97 aa12.61□□□□□ -0.39
MSH2-201ENST00000233146 ANXA3P12429 323 aa12.61□□□□□ -0.39
MSH2-201ENST00000233146 FGL1Q08830 312 aa12.61□□□□□ -0.39
MSH2-201ENST00000233146 PWP1Q13610 501 aa12.61□□□□□ -0.39
MSH2-201ENST00000233146 TRIQKQ629K1 86 aa12.61□□□□□ -0.39
MSH2-201ENST00000233146 FRMPD2BQ6IN97 320 aa12.61□□□□□ -0.39
MSH2-201ENST00000233146 DENND1CQ8IV53 801 aa12.61□□□□□ -0.39
MSH2-201ENST00000233146 SLC34A3Q8N130 599 aa12.61□□□□□ -0.39
MSH2-201ENST00000233146 ATP6V1C2Q8NEY4 427 aa12.61□□□□□ -0.39
MSH2-201ENST00000233146 WDR36Q8NI36 951 aaKnown RBP12.61□□□□□ -0.39
MSH2-201ENST00000233146 GANCQ8TET4 914 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms