RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 PARK7Q99497 189 aaKnown RBP13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 SPON2Q9BUD6 331 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 CLPBQ9H078 707 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 ZNF226Q9NYT6 803 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 PCDHGB2Q9Y5G2 931 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 HTTP42858 3142 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 SLITRK5O94991 958 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 TRAPPC2P0DI81 140 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 TRAPPC2BP0DI82 140 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 CHRNB1P11230 501 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 PCSK2P16519 638 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 KIR3DL1P43629 444 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 RFX2P48378 723 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 CRYBA2P53672 197 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 VEZF1Q14119 521 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 CPSF6Q16630 551 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 PPP2R2DQ66LE6 453 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 ZNF367Q7RTV3 350 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 STX19Q8N4C7 294 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 ST13P5Q8NFI4 369 aaPredicted RBP13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 FBXO32Q969P5 355 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 EGLN2Q96KS0 407 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 DEPDC7Q96QD5 511 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 RDH14Q9HBH5 336 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 EPN2O95208 641 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 LRATO95237 230 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 ZNF7P17097 686 aaPredicted RBP13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 TNFSF8P32971 234 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 ST3GAL4Q11206 333 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 NEK5Q6P3R8 708 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 ATCAYQ86WG3 371 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 DENND6BQ8NEG7 585 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 EID2BQ96D98 161 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 ADAM2Q99965 735 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 DPH2Q9BQC3 489 aaPredicted RBP13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 TMEM246Q9BRR3 403 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 C3orf14Q9HBI5 128 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 TMEM184CQ9NVA4 438 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 CRNNQ9UBG3 495 aaPredicted RBP13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 PCDHGA2Q9Y5H1 932 aa13.54□□□□□ -0.24
SCNN1A-201ENST00000228916 NPIPB8E9PQR5 432 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 H3BNC9 293 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 FPGTO14772 594 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 SCN2BO60939 215 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 STK16O75716 305 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 ITGA2P17301 1181 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 RRM2P31350 389 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 SLC6A4P31645 630 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 GNASQ5JWF2 1037 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 FAM209AQ5JX71 171 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 TSEN54Q7Z6J9 526 aaKnown RBP13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 ZNF280BQ86YH2 543 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 SYNPOQ8N3V7 929 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 RASSF5Q8WWW0 418 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 SELENOMQ8WWX9 145 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 CMTM7Q96FZ5 175 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 RNF170Q96K19 258 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 PANX1Q96RD7 426 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 FEVQ99581 238 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 BOCQ9BWV1 1114 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 TLR8Q9NR97 1041 aaKnown RBP13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 ADPRHL2Q9NX46 363 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 PADI2Q9Y2J8 665 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 PCDHB5Q9Y5E4 795 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 MAU2Q9Y6X3 613 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 TPD52L2O43399 206 aaKnown RBP13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 MAPK1P28482 360 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 MZF1P28698 734 aaPredicted RBP13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 WNT3P56703 355 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 IRF5Q13568 498 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 NFE2Q16621 373 aaPredicted RBP13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 TIMM50Q3ZCQ8 353 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 ZNF605Q86T29 641 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 SERINC5Q86VE9 423 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 SERPINA9Q86WD7 417 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 RAB43Q86YS6 212 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 RASAL3Q86YV0 1011 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 ATAD1Q8NBU5 361 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 PSD4Q8NDX1 1056 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 C9orf43Q8TAL5 461 aaPredicted RBP13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 TPD52L3Q96J77 140 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 CEP19Q96LK0 163 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 PHOX2BQ99453 314 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 ASAH2Q9NR71 780 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 ZNF451Q9Y4E5 1061 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 KCNE1BA0A087WTH5 132 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 MAGEB17A8MXT2 336 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 TMEM229AB2RXF0 380 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 SCAMP3O14828 347 aaKnown RBP13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 SLC25A14O95258 325 aaPredicted RBP13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 COL6A1P12109 1028 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 ACPPP15309 386 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 CTPS1P17812 591 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 MBOAT1Q6ZNC8 495 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 OR8H2Q8N162 312 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 CHTF18Q8WVB6 975 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 APIPQ96GX9 242 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 MCCC1Q96RQ3 725 aaPredicted RBP13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 KCNS3Q9BQ31 491 aa13.53□□□□□ -0.24
SCNN1A-201ENST00000228916 SLA2Q9H6Q3 261 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms