RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SRRDQ9UH36 339 aa12.89□□□□□ -0.35
COL1A1-201ENST00000225964 PLCL2Q9UPR0 1127 aa12.89□□□□□ -0.35
COL1A1-201ENST00000225964 GPR89AB7ZAQ6 455 aa12.89□□□□□ -0.35
COL1A1-201ENST00000225964 TLR4O00206 839 aa12.89□□□□□ -0.35
COL1A1-201ENST00000225964 GPR89BP0CG08 455 aa12.89□□□□□ -0.35
COL1A1-201ENST00000225964 CBSLP0DN79 551 aa12.89□□□□□ -0.35
COL1A1-201ENST00000225964 CBSP35520 551 aa12.89□□□□□ -0.35
COL1A1-201ENST00000225964 FBXL22Q6P050 247 aa12.89□□□□□ -0.35
COL1A1-201ENST00000225964 SLITRK4Q8IW52 837 aa12.89□□□□□ -0.35
COL1A1-201ENST00000225964 FCRL5Q96RD9 977 aa12.89□□□□□ -0.35
COL1A1-201ENST00000225964 HK1P19367 917 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 PRPS1L1P21108 318 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 TAS2R39P59534 338 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 FOXK1P85037 733 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 OR4F3Q6IEY1 312 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 MTMR14Q8NCE2 650 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 BRI3BPQ8WY22 251 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 IRF7Q92985 503 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 DGCR14Q96DF8 476 aaKnown RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 NPLQ9BXD5 320 aaPredicted RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 TTYH1Q9H313 450 aaPredicted RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 FLRT1Q9NZU1 646 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 LOC100509620A0A075B734 347 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 ITIH1P19827 911 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 ENTPD1P49961 510 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 SEMA3AQ14563 771 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 PDCD4Q53EL6 469 aaKnown RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 OR5T2Q8NGG2 359 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 POLR2J2Q9GZM3 115 aaKnown RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 PTGES2Q9H7Z7 377 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 ERVK-18Q9QC07 812 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 SCML2Q9UQR0 700 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 COL3A1P02461 1466 aaPredicted RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 PGLSO95336 258 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 PTNP21246 168 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 RALGPS1Q5JS13 557 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 EGFLAMQ63HQ2 1017 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 FOXR2Q6PJQ5 311 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 CRELD2Q6UXH1 353 aaPredicted RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 TREML1Q86YW5 311 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 NINJ1Q92982 152 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 PKP4Q99569 1192 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 TRPV4Q9HBA0 871 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 FTSJ1Q9UET6 329 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 POU2F3Q9UKI9 436 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 C14orf166Q9Y224 244 aaKnown RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 HS3ST4Q9Y661 456 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 SAGE2PA6NJ88 616 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 RAB8AP61006 207 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 DPY19L1Q2PZI1 675 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 DENND6BQ8NEG7 585 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 DNAJB8Q8NHS0 232 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 EFCAB11Q9BUY7 163 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 TRNAU1APQ9NX07 287 aaKnown RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 PCDHGA6Q9Y5G7 932 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 TEX13CA0A0J9YWL9 993 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 CH25HO95992 272 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 SRCP12931 536 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 HNRNPH3P31942 346 aaKnown RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 RPS13P62277 151 aaKnown RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 ERVK-8P63133 956 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 ARHGAP1Q07960 439 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 PTP4A2Q12974 167 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 ECH1Q13011 328 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 DNASE1L3Q13609 305 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 NPLOC4Q8TAT6 608 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 SH3YL1Q96HL8 342 aaPredicted RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 GATA5Q9BWX5 397 aaPredicted RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 HSPA12AO43301 675 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 MAN2A2P49641 1150 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 ELOCQ15369 112 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 ALG10Q5BKT4 473 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 SLC9A4Q6AI14 798 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 PIM3Q86V86 326 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 KCTD13Q8WZ19 329 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 MMABQ96EY8 250 aaPredicted RBP12.88□□□□□ -0.35
COL1A1-201ENST00000225964 EURLQ9NYK6 297 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 DNAJB9Q9UBS3 223 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 INSL5Q9Y5Q6 135 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 PEX16Q9Y5Y5 336 aa12.88□□□□□ -0.35
COL1A1-201ENST00000225964 BCL9LQ86UU0 1499 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 ADAMTS3O15072 1205 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 OAZ2O95190 189 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 GBAP04062 536 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 SLC11A1P49279 550 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 GEMIN6Q8WXD5 167 aaKnown RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 JPH3Q8WXH2 748 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 TFGQ92734 400 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 CPNE2Q96FN4 548 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 IL21RQ9HBE5 538 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 USP29Q9HBJ7 922 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 RBMX2Q9Y388 322 aaKnown RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 HTR3EA5X5Y0 456 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 SRRM3A6NNA2 597 aaPredicted RBP12.87□□□□□ -0.35
COL1A1-201ENST00000225964 IFNA21P01568 189 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 NR2C1P13056 603 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 BMP8BP34820 402 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 CREB5Q02930 508 aa12.87□□□□□ -0.35
COL1A1-201ENST00000225964 C1orf189Q5VU69 101 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms