RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 HDAC2Q92769 488 aaKnown RBP12.71□□□□□ -0.37
CTNS-201ENST00000046640 FKBP10Q96AY3 582 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 ABHD8Q96I13 439 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 REXO4Q9GZR2 422 aaKnown RBP12.71□□□□□ -0.37
CTNS-201ENST00000046640 VNN3Q9NY84 501 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 PPIL1Q9Y3C6 166 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 CLDN25C9JDP6 229 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 hCG_2039718K7EN88 272 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 SAP18O00422 153 aaKnown RBP12.71□□□□□ -0.38
CTNS-201ENST00000046640 SLC16A8O95907 504 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 VIPR1P32241 457 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 DCTP40126 519 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 NNMTP40261 264 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 SLC6A12P48065 614 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 TMED10P49755 219 aaKnown RBP12.71□□□□□ -0.38
CTNS-201ENST00000046640 NCS1P62166 190 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 FXNQ16595 210 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 NIPAL1Q6NVV3 410 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 ZCCHC8Q6NZY4 707 aaKnown RBP12.71□□□□□ -0.38
CTNS-201ENST00000046640 LRRC70Q7Z2Q7 622 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 DSG4Q86SJ6 1040 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 THOC6Q86W42 341 aaKnown RBP12.71□□□□□ -0.38
CTNS-201ENST00000046640 C12orf40Q86WS4 652 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 SFTPA1Q8IWL2 248 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 HPS1Q92902 700 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 PANX1Q96RD7 426 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 SLC29A3Q9BZD2 475 aa12.71□□□□□ -0.38
CTNS-201ENST00000046640 GPN2Q9H9Y4 310 aaPredicted RBP12.71□□□□□ -0.38
CTNS-201ENST00000046640 NOTCH4Q99466 2003 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 GFYI3L273 518 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 K7ESM1 405 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 BCKDKO14874 412 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 ETHE1O95571 254 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 ANGPTL1O95841 491 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 NTRK1P04629 796 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 JUNBP17275 347 aaPredicted RBP12.7□□□□□ -0.38
CTNS-201ENST00000046640 PTPN2P17706 415 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 AMD1P17707 334 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 VIPR2P41587 438 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 PPP2R2BQ00005 443 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 IFITM3Q01628 133 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 DOC2AQ14183 400 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 TMEM220Q6QAJ8 160 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 ADCK1Q86TW2 530 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 C12orf76Q8N812 135 aaPredicted RBP12.7□□□□□ -0.38
CTNS-201ENST00000046640 ARL10Q8N8L6 244 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 MRPL43Q8N983 215 aaKnown RBP12.7□□□□□ -0.38
CTNS-201ENST00000046640 RPL3LQ92901 407 aaKnown RBP12.7□□□□□ -0.38
CTNS-201ENST00000046640 TMEM159Q96B96 161 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 AP2M1Q96CW1 435 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 ALPK1Q96QP1 1244 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 RBM4BQ9BQ04 359 aaKnown RBP12.7□□□□□ -0.38
CTNS-201ENST00000046640 RBM4Q9BWF3 364 aaKnown RBP12.7□□□□□ -0.38
CTNS-201ENST00000046640 BTBD3Q9Y2F9 522 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 PRKAB1Q9Y478 270 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 A8MU76 341 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 ZNF99A8MXY4 864 aaPredicted RBP12.7□□□□□ -0.38
CTNS-201ENST00000046640 YY2O15391 372 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 ABCB1P08183 1280 aaPredicted RBP12.7□□□□□ -0.38
CTNS-201ENST00000046640 ELFN1P0C7U0 828 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 COX7A2P14406 83 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 EPHA2P29317 976 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 AQP1P29972 269 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 ISL1P61371 349 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 MEF2AQ02078 507 aaPredicted RBP12.7□□□□□ -0.38
CTNS-201ENST00000046640 INAQ16352 499 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 CTF1Q16619 201 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 ZNF284Q2VY69 593 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 ADPRMQ3LIE5 342 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 TMEM132CQ8N3T6 1108 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 MRGPRX3Q96LB0 322 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 SAMD11Q96NU1 681 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 NRTNQ99748 197 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 GORASP2Q9H8Y8 452 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 ORC6Q9Y5N6 252 aa12.7□□□□□ -0.38
CTNS-201ENST00000046640 MAGEB17A8MXT2 336 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 WASH3PC4AMC7 463 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 KDM1AO60341 852 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 KIR3DL1P43629 444 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 CDK5R2Q13319 367 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 NPTX1Q15818 432 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 ARHGAP15Q53QZ3 475 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 BRAT1Q6PJG6 821 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 AGTRAPQ6RW13 159 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 DCP2Q8IU60 420 aaKnown RBP12.69□□□□□ -0.38
CTNS-201ENST00000046640 RORBQ92753 470 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 MAGED4Q96JG8 741 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 OR4K3Q96R72 315 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 MIR1-1HGQ9H1L0 117 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 IL36AQ9UHA7 158 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 ENPP5Q9UJA9 477 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 PLXNB3Q9ULL4 1909 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 SOBPA7XYQ1 873 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 FPGTO14772 594 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 LAMP1P11279 417 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 CYP2A6P11509 494 aaPredicted RBP12.69□□□□□ -0.38
CTNS-201ENST00000046640 CEBPBP17676 345 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 ENGP17813 658 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 PTPN5P54829 565 aa12.69□□□□□ -0.38
CTNS-201ENST00000046640 CREMQ03060 361 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms