RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Sh3rf1Q69ZI1 892 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Amigo3Q8C2S7 508 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ndc1Q8VCB1 673 aaKnown RBP11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr1276Q8VF40 312 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tspan1Q99J59 240 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Mpp5Q9JLB2 675 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm3149E9PW52 257 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm8362K7N6Y6 257 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dnmt3aO88508 908 aaKnown RBP11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Crisp1Q03401 244 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cpne7Q0VE82 557 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Kcnh6Q32ME0 950 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc2a9Q3T9X0 538 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Snx33Q4VAA7 574 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr677Q8VF06 312 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cavin3Q91VJ2 260 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gpihbp1Q9D1N2 228 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Borcs8Q9D6Y4 120 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Il21Q9ES17 146 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr1049A2ARZ0 308 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Arl16B1ATY8 173 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cyp2w1E9Q816 493 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc6a20bO88575 635 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 PtpraP18052 829 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 FechP22315 420 aaKnown RBP11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Lrrc58Q3UGP9 366 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Phf12Q5SPL2 1003 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Sp140Q6NSQ5 534 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc36a2Q8BHK3 478 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc6a20aQ8VDB9 592 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Wasf3Q8VHI6 501 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dhx36Q8VHK9 1001 aaKnown RBP11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Oas1hQ8VI97 369 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cryl1Q99KP3 319 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Actl6bQ99MR0 426 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Bhlhe41Q99PV5 410 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ndufs4Q9CXZ1 175 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Coro1bQ9WUM3 484 aaKnown RBP11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm17190V9GX38 357 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm14085A2AWR5 660 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dlg3P70175 849 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Zmiz1Q6P1E1 1072 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 AasdhQ80WC9 1100 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Amigo1Q80ZD8 492 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Nudt15Q8BG93 170 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Q8C0X8 640 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Hid1Q8R1F6 788 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Zfp617Q91WM0 559 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 FcrlaQ920A9 352 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tor1bQ9ER41 336 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Adgrb1Q3UHD1 1582 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Sec14l1A8Y5H7 715 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Obox6G3X9U1 347 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 E2f3O35261 457 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 ShdO88834 343 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 KizQ3UXL4 695 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Kcnj11Q61743 390 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cmtr2Q8BWQ4 767 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ildr1Q8CBR1 537 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cbr4Q91VT4 236 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Spz1Q99MY0 378 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 PacrglQ9D3X5 248 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Lmx1aQ9JKU8 382 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Eci2Q9WUR2 391 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Klrb1bP27812 223 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Klrb1cP27814 223 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Uimc1Q5U5Q9 727 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Fzd4Q61088 537 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Kctd7Q8BJK1 289 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Arf2Q8BSL7 181 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Mob2Q8VI63 235 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Krcc1Q99JT5 256 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 GmfgQ9ERL7 142 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ankrd12G5E893 2041 aa11.66□□□□□ -0.54
Trim56-201ENSMUST00000054384 Chd3B1AR17 2055 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr456B2RT27 312 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm498D3YYH9 372 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Elovl3O35949 271 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ckmt1P30275 418 aaKnown RBP11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Q3UUX7 111 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc10a7Q5PT53 340 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tas2r136Q7TQA8 305 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tmem150cQ8C8S3 249 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr458Q8VF80 313 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr1395Q8VGD7 317 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr457Q8VGP5 313 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 HhatlQ9D1G3 503 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slamf8Q9D3G2 278 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 DstnQ9R0P5 165 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Btg4O70552 250 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cfl1P18760 166 aaKnown RBP11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Q3U7U4 132 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Eif1aQ60872 144 aaKnown RBP11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Abhd10Q6PE15 297 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Vtcn1Q7TSP5 283 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 ItpaQ9D892 198 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tor1aQ9ER39 333 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pcdhgb8A0A140LI48 931 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tmigd3G3X8R9 209 aa11.65□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm17026K7N6Z0 213 aa11.65□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 105.3 ms