RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Dppa4Q8CCG4 296 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Hmgcs1Q8JZK9 520 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Acsl5Q8JZR0 683 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Kiaa0513Q8R0A7 407 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Slc25a46Q9CQS4 418 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Psg23Q9D2U0 471 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Ppil6Q9D6D8 278 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Mbd3l1Q9D9H3 186 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Ift22Q9DAI2 185 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Psg21Q9DAV5 471 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Mbtps1Q9WTZ2 1052 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Olfr485A0A140LJF5 317 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Cd300ld2A2A7W0 305 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Gm14744B1AVU4 173 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Clip3B9EHT4 547 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Gm17615E9Q9P2 165 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Gm20695H3BLK7 282 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 NsmafO35242 920 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 JtbO88824 146 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 HmgclP38060 325 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Cfl2P45591 166 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Atp6v1e1P50518 226 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Ntsr2P70310 416 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Slc26a10Q5EBI0 492 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 PtprnQ60673 979 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Klf4Q60793 483 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Ca4Q64444 305 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Inppl1Q6P549 1257 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Sdr16c5Q7TQA3 309 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Olfr366Q7TRY4 309 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Mib1Q80SY4 1006 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Serpina3fQ80X76 445 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 LppQ8BFW7 613 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Rgs7bpQ8BQP9 257 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Ifnl3Q8CGK6 193 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 HnrnplQ8R081 586 aaKnown RBP14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Ak6Q8VCP8 172 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Olfr561Q8VGZ6 314 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Ndufs2Q91WD5 463 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Cyp4f3Q99N16 524 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 5430402E10RikQ9D3N5 173 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Hspb11Q9D6H2 143 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Sacm1lQ9EP69 587 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Il1rl2Q9ERS7 574 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Zbtb32Q9JKD9 465 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Prss16Q9QXE5 509 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Col11a1Q61245 1804 aa14.37□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Igkv5-43A0A0B4J1J2 115 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Gm3159K7N760 267 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 IduaP48441 634 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Fabp7P51880 132 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Gabrr2P56476 465 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Dppa5bP85965 119 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Padi2Q08642 673 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Rars2Q3U186 578 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Slc16a10Q3U9N9 512 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Eef2kmtQ3UZW7 335 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Egfl8Q6GUQ1 293 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Tm7sf2Q71KT5 418 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Olfr664Q7TRP5 306 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Hus1Q8BQY8 280 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Zhx3Q8C0Q2 951 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Wdr47Q8CGF6 920 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Pdlim5Q8CI51 591 aaKnown RBP14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Vmn1r30Q8R2D2 302 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Neto1Q8R4I7 533 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 CtsqQ91ZF4 343 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 AmnQ99JB7 458 aaKnown RBP14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Eif3mQ99JX4 374 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Trappc4Q9ES56 219 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Znf207Q9JMD0 495 aaKnown RBP14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Nipsnap3aB1AWZ3 247 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Cilp2D3Z7H8 1162 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Gm28048F7BCN0 99 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Foxd2O35392 492 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 MgllO35678 303 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Efna1P52793 205 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Rab2bP59279 216 aaKnown RBP14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 TekQ02858 1122 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 SPINDOCQ05AH6 381 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Fut4Q11127 433 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Eml4Q3UMY5 988 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Afg1lQ3V384 480 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Gpalpp1Q69ZC8 346 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Fam149b1Q6NSV7 578 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Slc39a4Q78IQ7 660 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Scn4bQ7M729 228 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Lrp10Q7TQH7 713 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Fam72aQ8BFZ8 149 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Ccdc126Q8BIS8 140 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Fam131aQ8BWU3 361 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Syne4Q8CII8 388 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Cox18Q8VC74 331 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Vps4aQ8VEJ9 437 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Olfr371Q8VGB8 312 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Adgrl4Q923X1 739 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Mcoln1Q99J21 580 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Atp5f1Q9CQQ7 256 aaKnown RBP14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Tlr1Q9EPQ1 795 aa14.36□□□□□ -0.11
Ushbp1-201ENSMUST00000049184 Trip4Q9QXN3 581 aa14.36□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms