RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 MatkP41242 505 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 VldlrP98156 873 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Q32P12 615 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Pomt2Q8BGQ4 820 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Ugt2b35Q8BJL9 529 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Taf10Q8K0H5 218 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Adap2Q8R2V5 381 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 2410137M14RikQ9CWF0 162 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Map3k3Q61084 626 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fcrl5Q68SN8 596 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Ca12Q8CI85 354 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 NeproQ8R2U2 564 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gpn1Q8VCE2 372 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cavin3Q91VJ2 260 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Acox2Q9QXD1 681 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gm3149E9PW52 257 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Zfr2E9Q5M4 874 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gm8362K7N6Y6 257 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Hoxc8P09025 242 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gja1P23242 382 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Acsl1P41216 699 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Rab2bP59279 216 aaKnown RBP16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gata6Q61169 589 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tas2r13Q7M720 305 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Q80VP5 184 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Dnajc5bQ9CQ94 199 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 BvesQ9ES83 358 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Med20Q9R0X0 212 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fam155bA2BDP1 471 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Dpy19l2P0CW70 773 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cyp2f2P33267 491 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Taf1aP97357 453 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Spata48Q5NC83 441 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Spz1Q99MY0 378 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Arfgap3Q9D8S3 523 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Aldh3b2E9Q3E1 479 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Esp34G3UXG0 151 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Scrg1O88745 98 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc25a51Q5HZI9 298 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Zdhhc24Q6IR37 284 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 BoraQ8BS90 525 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Phf21bQ8C966 487 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Akr1c18Q8K023 323 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Klk6Q91Y82 253 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 DstnQ9R0P5 165 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Vmn2r11E9Q4X4 861 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Lcn10Q810Z1 182 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Il17reQ8BH06 637 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr689Q8VG18 320 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 FcrlaQ920A9 352 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tssk4Q9D411 328 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Ebf2O08792 575 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 DmpkP54265 631 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Crisp1Q03401 244 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Brinp2Q6DFY8 783 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tmem41aQ9D8U2 264 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tgm7A2ART8 616 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr1145A2AVC7 325 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Itgb1P09055 798 aaKnown RBP16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Lrrc74bQ14BP6 391 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Q3UK37 420 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Arhgap1Q5FWK3 439 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Spock1Q62288 442 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Ptcd2Q8R3K3 381 aaKnown RBP16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Uqcrc2Q9DB77 453 aaKnown RBP16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Aqp4P55088 323 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Pld2P97813 933 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Aoc2Q812C9 757 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Col25a1Q99MQ5 666 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slamf8Q9D3G2 278 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Akr1e2Q9DCT1 301 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 NalcnQ8BXR5 1738 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Sez6l2Q4V9Z5 910 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Upk1bQ9Z2C6 260 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 PikfyveQ9Z1T6 2097 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gm33543A0A1B0GSI5 81 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc36a2Q8BHK3 478 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 B3glctQ8BHT6 489 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Mfsd6Q8CBH5 775 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr1280Q8VGG8 305 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 St6galnac1Q9QZ39 526 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Kiaa0100Q5SYL3 2234 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Elovl3O35949 271 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cdk10Q3UMM4 360 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Pou4f2Q63934 411 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Chrnb3Q8BMN3 464 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Pafah2Q8VDG7 390 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Plekhj1Q9D240 164 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Bcas2Q9D287 225 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gm17190V9GX38 357 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Smpd2O70572 419 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Timm13P62075 95 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Actc1P68033 377 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Acta1P68134 377 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Scn4bQ7M729 228 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tmem246Q91YV9 403 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 RTRAFQ9CQE8 244 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Rexo2Q9D8S4 237 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Sult1b1Q9QWG7 299 aa16.18■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Zfp53Q9Z117 652 aa16.18■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms