RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 NrmQ8VC65 262 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Olfr1494Q8VGP8 315 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Klk6Q91Y82 253 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Fcf1Q9CTH6 198 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gtf2e2Q9D902 292 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Slc35a2Q9R0M8 390 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gm37596A0A0A6YXL2 336 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gm13089A2AGW7 455 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ap1arE9PYF7 298 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Vmn1r25H3BLP0 302 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Il13ra1O09030 424 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Clcn7O70496 803 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Il1rnP25085 178 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Pde7aP70453 456 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Neurog1P70660 244 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Bpifa6Q0VGU8 367 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Olfr503Q7TRU8 323 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Itih5Q8BJD1 952 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Amz1Q8BVF9 502 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ccdc142Q8CAI1 738 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cfap61Q8CEL2 1252 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 C1rbQ8CFG9 706 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ifnl3Q8CGK6 193 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Akr1c20Q8VC77 323 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Rsph1Q8VIG3 301 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Mrgpra2Q91WW4 305 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cadm3Q99N28 396 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Kdelr2Q9CQM2 212 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Zdhhc21Q9D270 265 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Psg23Q9D2U0 471 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Psg21Q9DAV5 471 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Capn10Q9ESK3 666 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Fhl5Q9WTX7 284 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Kif26aQ52KG5 1881 aa13.04□□□□□ -0.32
Nup88-201ENSMUST00000035283 Zfp600A2A7V0 737 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Zcchc7B1AX39 541 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Rgs4O08899 205 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Asna1O54984 348 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Prdx3P20108 257 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Mmp11Q02853 492 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Scgb1a1Q06318 96 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cntnap5bQ0V8T8 1292 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Znf800Q0VEE6 662 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ankrd28Q505D1 1053 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Tmem151bQ68FE7 561 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Itln1bQ80ZA0 313 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Reep1Q8BGH4 201 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ppm1nQ8BGL1 404 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 NapepldQ8BH82 396 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cstf2Q8BIQ5 580 aaKnown RBP13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 AntxrlQ8BVM2 641 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ttc24Q8BYG0 334 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 H2-Q4Q8HWB2 354 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Unc5aQ8K1S4 898 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Neto1Q8R4I7 533 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Olfr348Q8VGK3 313 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ankra2Q99PE2 312 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Nif3l1Q9EQ80 376 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Olfr1253A2AUA2 318 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 SelenovD3YXG1 328 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gm17093F6XGJ4 214 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gm3159K7N760 267 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Gpx5P21765 221 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 StsP50427 624 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Copz1P61924 177 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Eef1a2P62631 463 aaKnown RBP13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Sh2d1b2Q45HK4 132 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 BC080695Q66JY9 481 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Olig3Q6PFG8 273 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Fblim1Q71FD7 375 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Znf503Q7TMA2 652 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Olfr1251Q7TQZ3 318 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Olfr412Q7TRW7 312 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Olfr448Q8VES9 310 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Dlg2Q91XM9 852 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 L3hypdhQ9CXA2 354 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Rab13Q9DD03 202 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Prl5a1Q9JII2 230 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 SrrQ9QZX7 339 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Spo11Q9WTK8 396 aa13.03□□□□□ -0.32
Nup88-201ENSMUST00000035283 Sppl2cA2A6C4 690 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Ism1A2ATD1 454 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Lcn11A2BHR2 178 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Prdm14E9Q3T6 561 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Fmo6J3QMN6 532 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Shisa8J3QNX5 399 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 P01807 119 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 GlrbP48168 496 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 HccsP53702 272 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Nfatc2Q60591 927 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Klf4Q60793 483 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Foxj1Q61660 421 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Egfl8Q6GUQ1 293 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Cdh24Q6PFX6 781 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Sdr16c5Q7TQA3 309 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Tas2r39Q7TQA5 319 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Trim36Q80WG7 729 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 Bcas1Q80YN3 633 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 AardQ811W1 167 aa13.02□□□□□ -0.32
Nup88-201ENSMUST00000035283 B3galnt2Q8BG28 504 aa13.02□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 501.1 ms