RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 C6.1alQ7M757 291 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cyp20a1Q8BKE6 462 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Spin4Q8K1L2 249 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Paip1Q8VE62 400 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr846Q8VET8 312 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Nt5c1bQ91YE9 573 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cdca5Q9CPY3 264 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Commd4Q9CQ02 199 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rsph9Q9D9V4 276 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Inpp5aE9QAS7 422 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gm2035J3QP87 144 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Klrb1aP27811 227 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rln1P47932 185 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Kirrel1Q80W68 789 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cox15Q8BJ03 413 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Azin2Q8BVM4 459 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Eipr1Q8K0G5 386 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Tdp2Q9JJX7 370 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Htatip2Q9Z2G9 242 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rnf169E9Q7F2 694 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Slc32a1O35633 525 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cfl1P18760 166 aaKnown RBP9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Mmp3P28862 477 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 StacP97306 403 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cd163Q2VLH6 1121 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Eri1Q7TMF2 345 aaKnown RBP9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr1353Q8VGU8 309 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 BollQ924M5 281 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Asf1aQ9CQE6 204 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Txndc17Q9CQM5 123 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 GhrlQ9EQX0 117 aa9.9□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Pgap3A2A559 320 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rex2A2AWF2 685 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Prrt4B2RU40 902 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 FgaE9PV24 789 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr731F8VQB9 326 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Hoxc13P50207 328 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Hephl1Q3V1H3 1159 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Trp53i11Q4QQM4 189 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Clcn4Q61418 747 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 ClmpQ8R373 373 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rnf146Q9CZW6 359 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Med8Q9D7W5 268 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tprg1lQ9DBS2 266 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Sorcs1Q9JLC4 1167 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 PtgfrnQ9WV91 879 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 HephQ9Z0Z4 1157 aa9.9□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cyp4a29A0A087WPC3 509 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Nt5c1aA3KFX0 365 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Nlrp12E9Q5R7 1054 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cyp4a31F8WGU9 509 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Vmn2r85G3UW56 850 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc16a3P57787 470 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 F8a1Q00558 380 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc2a9Q3T9X0 538 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Qsox2Q3TMX7 692 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Serpinf2Q61247 491 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 SnupnQ80W37 358 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Yae1d1Q9DAY6 216 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Aldoart1A6ZI46 419 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Kcnk1O08581 336 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Msi1Q61474 362 aaKnown RBP9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Jak3Q62137 1100 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Kir3dl2Q673W2 388 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Zfp943Q6NZP4 507 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ccdc117Q6PB51 277 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Jazf1Q80ZQ5 243 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tdp1Q8BJ37 609 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Las2Q8CB14 526 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Atg10Q8R1P4 215 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Olfr1352Q8VGX5 309 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Slc3a1Q91WV7 685 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cryl1Q99KP3 319 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cntn6Q9JMB8 1028 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Gpd1P13707 349 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Zfp37P17141 594 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Tas2r117Q7M715 330 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Hsdl1Q8BTX9 330 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Mrpl48Q8JZS9 211 aaKnown RBP9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 CtbsQ8R242 366 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Ttc36Q8VBW8 186 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 SelenosQ9BCZ4 190 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 ProzQ9CQW3 399 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 2410137M14RikQ9CWF0 162 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Upk3bl1Q9D701 249 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Il1rl2Q9ERS7 574 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Hipk2Q9QZR5 1196 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Trim3Q9R1R2 744 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Xpnpep3B7ZMP1 506 aaKnown RBP9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 4933408B17RikG3X9B4 273 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rad51dO55230 329 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Rpl19P84099 196 aaKnown RBP9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Prdx5P99029 210 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 CilpQ66K08 1184 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Q6PAC4 1279 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Cnih3Q6ZWS4 160 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Got1l1Q7TSV6 404 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Susd6Q8BGE4 302 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 IlvblQ8BU33 632 aa9.89□□□□□ -0.83
Ubr1-201ENSMUST00000028728 Vmn1r206Q8R277 312 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms