RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Dhrs1Q99L04 313 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Duox1A2AQ92 1551 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Gm3327F7C9A1 213 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Psmd3P14685 530 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Kcnn3P58391 732 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Nxpe2Q3U095 558 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Zbtb2Q3V3W4 514 aaKnown RBP16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Zfp791Q497V9 528 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 CochQ62507 552 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Tgm4Q8BZH1 670 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Galnt11Q921L8 608 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Lysmd3Q99LE3 305 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 B020004C17RikJ3QP07 232 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 AlyrefO08583 255 aaKnown RBP16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Klf10O89091 479 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Fcrl5Q68SN8 596 aa16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Ago1Q8CJG1 857 aaKnown RBP16.32■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Cbx4O55187 551 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 PargO88622 969 aaKnown RBP16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 FcamrQ2TB54 535 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Wdr18Q4VBE8 431 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Vmn2r81Q80Z09 865 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Nceh1Q8BLF1 408 aaKnown RBP16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Zc2hc1cQ8CCG1 527 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Pcdhga11Q91XY8 933 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Stra6lQ9DBN1 621 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Tgm1Q9JLF6 815 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Xpnpep3B7ZMP1 506 aaKnown RBP16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Calhm3J3QMI4 347 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Rln1P47932 185 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Gad2P48320 585 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Oaz1P54369 227 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Tas2r7P59530 312 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Ints6Q6PCM2 883 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Bag6Q9Z1R2 1154 aaKnown RBP16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Btbd35f21A0A140T8Q5 498 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Btbd35f22J3QN64 498 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Psmc3ipO35047 217 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 MyrflQ3UN70 904 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Snx21Q3UR97 363 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Creg2Q8BGC9 288 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Prokr2Q8K458 381 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Pdia5Q921X9 517 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 ApmapQ9D7N9 415 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Gpr45Q9EQQ4 373 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Oxct2bQ9ESL0 520 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Dclre1aQ9JIC3 1026 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Fbxo47A2A6H3 451 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Nt5c1aA3KFX0 365 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 C9P06683 548 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Serpine2Q07235 397 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Ppp3r1Q63810 170 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Ntan1Q64311 310 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Calm5Q6W3E0 140 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Krcc1Q99JT5 256 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Rbm7Q9CQT2 265 aaKnown RBP16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Hddc3Q9D114 179 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Fam90a1bQ9D4F3 419 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Mfsd2aQ9DA75 534 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 HaghlQ9DB32 283 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Cyp3a41aQ9JMA7 504 aa16.31■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Fam46dB1ATX6 390 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 F6Y6L6 278 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Olfr731F8VQB9 326 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 AhcyP50247 432 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Fnip2Q80TD3 1108 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Mgat4aQ812G0 535 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Zfp719Q8BIV1 735 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Olfr952Q8VFD7 314 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Mgme1Q9CXC3 338 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Cntnap5aQ0V8T9 1304 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Gm42372A0A1B0GT27 204 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Olfr596F8VQ26 312 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Gja1P23242 382 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Q3TYS2 187 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 G2e3Q5RJY2 716 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Bmp3Q8BHE5 468 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Csnka2ipQ8CH19 720 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Ces2aQ8QZR3 558 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Myh4Q5SX39 1939 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Olfr675A0A1B0GSE1 317 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Itga10E9Q6R1 1167 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Scamp3O35609 349 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 DhfrP00375 187 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Btbd1P58544 488 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Secisbp2Q3U1C4 858 aaKnown RBP16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Dyrk2Q5U4C9 599 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Ints7Q7TQK1 966 aaKnown RBP16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Clec4a1Q80UI7 245 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Tmem62Q8BXJ9 643 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Fam46bQ8C152 427 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Olfr450Q8VF81 310 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Spg21Q9CQC8 308 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Entpd4Q9DBT4 613 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Trim3Q9R1R2 744 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 AunipE9Q6Z5 340 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Cldn5O54942 218 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Pou2f2Q00196 463 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Mccc2Q3ULD5 563 aa16.3■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Zfp82Q6P9Y7 530 aa16.3■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms