RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 SSTR2P30874 369 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 CCNFP41002 786 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 TTPAP49638 278 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 SESN2P58004 480 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-228ENST00000639659 KRTAP10-9P60411 292 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 ALDH6A1Q02252 535 aaKnown RBP14.23□□□□□ -0.13
SYNE2-228ENST00000639659 TBX2Q13207 712 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-228ENST00000639659 NAA25Q14CX7 972 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 CDSNQ15517 529 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 FBXO42Q6P3S6 717 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 LANCL3Q6ZV70 420 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 PEX26Q7Z412 305 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 PRUNE1Q86TP1 453 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 ZC3H7AQ8IWR0 971 aaKnown RBP14.23□□□□□ -0.13
SYNE2-228ENST00000639659 CCDC170Q8IYT3 715 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 ZNF295-AS1Q8N0V1 137 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 BEST3Q8N1M1 668 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 UBL4BQ8N7F7 174 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 CHTF18Q8WVB6 975 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 PLCD4Q9BRC7 762 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 TUBB6Q9BUF5 446 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 HES7Q9BYE0 225 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 DRC3Q9H069 523 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 RNF32Q9H0A6 362 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 SYNPO2LQ9H987 977 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 SPATA7Q9P0W8 599 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 AMFRQ9UKV5 643 aa14.23□□□□□ -0.13
SYNE2-228ENST00000639659 AKAP9Q99996 3911 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 GRID2IPA4D2P6 1211 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 ERI2A8K979 691 aaKnown RBP14.22□□□□□ -0.13
SYNE2-228ENST00000639659 NPIPA5E9PKD4 350 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 KPNA5O15131 536 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 TTI1O43156 1089 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 DIAPH2O60879 1101 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 CLDN14O95500 239 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 FTCDO95954 541 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 APRTP07741 180 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 ICAM2P13598 275 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 CRADDP78560 199 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 ACVR1Q04771 509 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 CDH24Q86UP0 819 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 PLD3Q8IV08 490 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 PPFIBP2Q8ND30 876 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 SLC35B2Q8TB61 432 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 HMGCLL1Q8TB92 370 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 MVB12AQ96EY5 273 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 TSPY26PQ9H489 355 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 KCNK13Q9HB14 408 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 CHRAC1Q9NRG0 131 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 ENAMQ9NRM1 1142 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 RAB6BQ9NRW1 208 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 NPIPA1Q9UND3 350 aa14.22□□□□□ -0.13
SYNE2-228ENST00000639659 HIVEP1P15822 2718 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 CACNA1CQ13936 2221 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 LOC102723996A0A087X1L8 192 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 P2RX6O15547 441 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 FOXS1O43638 330 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 NIPSNAP2O75323 286 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 MLYCDO95822 493 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 SYF2O95926 243 aaKnown RBP14.21□□□□□ -0.13
SYNE2-228ENST00000639659 ETS1P14921 441 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 ABOP16442 354 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 FMO4P31512 558 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 FDFT1P37268 417 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 SLC26A3P40879 764 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 KIR3DL1P43629 444 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 AVPR1BP47901 424 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 EFNA3P52797 238 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 OC90Q02509 493 aaPredicted RBP14.21□□□□□ -0.13
SYNE2-228ENST00000639659 TLE4Q04727 773 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.21□□□□□ -0.13
SYNE2-228ENST00000639659 THEMIS2Q5TEJ8 643 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 C3P1Q6ZMU1 363 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 KIAA1328Q86T90 577 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 PAQR7Q86WK9 346 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 ACRBPQ8NEB7 543 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 OR9A1PQ8NGU1 263 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 SMPDL3AQ92484 453 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 GPR137Q96N19 417 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 SIGLEC12Q96PQ1 595 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 TRIM5Q9C035 493 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 VN1R1Q9GZP7 353 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 P2RY12Q9H244 342 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 HCN3Q9P1Z3 774 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 RIMKLBQ9ULI2 386 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 KLK4Q9Y5K2 254 aa14.21□□□□□ -0.13
SYNE2-228ENST00000639659 MED13LQ71F56 2210 aa14.21□□□□□ -0.14
SYNE2-228ENST00000639659 A0A1W2PQ72 361 aa14.2□□□□□ -0.14
SYNE2-228ENST00000639659 ARHGEF33A8MVX0 844 aa14.2□□□□□ -0.14
SYNE2-228ENST00000639659 GOLGA8KD6RF30 607 aa14.2□□□□□ -0.14
SYNE2-228ENST00000639659 GOLGA8TH3BQL2 631 aa14.2□□□□□ -0.14
SYNE2-228ENST00000639659 HAT1O14929 419 aa14.2□□□□□ -0.14
SYNE2-228ENST00000639659 CCNDBP1O95273 360 aa14.2□□□□□ -0.14
SYNE2-228ENST00000639659 EEF1DP29692 281 aaKnown RBP14.2□□□□□ -0.14
SYNE2-228ENST00000639659 HSF1Q00613 529 aa14.2□□□□□ -0.14
SYNE2-228ENST00000639659 SNX1Q13596 522 aa14.2□□□□□ -0.14
SYNE2-228ENST00000639659 TUBA3CQ13748 450 aa14.2□□□□□ -0.14
SYNE2-228ENST00000639659 OR1C1Q15619 314 aa14.2□□□□□ -0.14
SYNE2-228ENST00000639659 NDUFA9Q16795 377 aa14.2□□□□□ -0.14
SYNE2-228ENST00000639659 ANKRD20A4Q4UJ75 823 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms