RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 TMEM207Q6UWW9 146 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 ARHGEF39Q8N4T4 335 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 FBXO36Q8NEA4 188 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 COL26A1Q96A83 441 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 MIB2Q96AX9 1013 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 RUNDC3BQ96NL0 473 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 MACROD1Q9BQ69 325 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 SLC26A1Q9H2B4 701 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 ZBTB20Q9HC78 741 aaPredicted RBP16.89■□□□□ 0.29
PNKP-230ENST00000638016 ZNF304Q9HCX3 659 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 ANKMY1Q9P2S6 941 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 SCN3AQ9NY46 2000 aa16.89■□□□□ 0.29
PNKP-230ENST00000638016 HECTD1Q9ULT8 2610 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 RP1L1Q8IWN7 2480 aaPredicted RBP16.88■□□□□ 0.29
PNKP-230ENST00000638016 VSTM2BA6NLU5 285 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 ZNF839A8K0R7 811 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 PEX12O00623 359 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 CCNDBP1O95273 360 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 MMP11P24347 488 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 RGS4P49798 205 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 ZNF460Q14592 562 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 UGT3A1Q6NUS8 523 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 KIRREL2Q6UWL6 708 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 KIAA0408Q6ZU52 694 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 LAPTM4BQ86VI4 370 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 MYO1HQ8N1T3 1032 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 GALNT16Q8N428 558 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 Q8NA96 180 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 STT3BQ8TCJ2 826 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 FER1L6-AS2Q96M78 137 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 SMAD5Q99717 465 aaKnown RBP16.88■□□□□ 0.29
PNKP-230ENST00000638016 ZNF552Q9H707 407 aaPredicted RBP16.88■□□□□ 0.29
PNKP-230ENST00000638016 WDR54Q9H977 334 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 CCDC177Q9NQR7 707 aaPredicted RBP16.88■□□□□ 0.29
PNKP-230ENST00000638016 SMYD2Q9NRG4 433 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 ZNF451Q9Y4E5 1061 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 FLNCQ14315 2725 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 PTPN13Q12923 2485 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 COL12A1Q99715 3063 aa16.88■□□□□ 0.29
PNKP-230ENST00000638016 A0A0A6YYC8 382 aaPredicted RBP16.87■□□□□ 0.29
PNKP-230ENST00000638016 FEZF1A0PJY2 475 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 TTLL8A6PVC2 850 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 E7ESA3 106 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 I3L1I5 382 aaPredicted RBP16.87■□□□□ 0.29
PNKP-230ENST00000638016 AGPSO00116 658 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 EIF3FO00303 357 aaPredicted RBP16.87■□□□□ 0.29
PNKP-230ENST00000638016 RAD51CO43502 376 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 FOXS1O43638 330 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 SORBS2O94875 1100 aaKnown RBP16.87■□□□□ 0.29
PNKP-230ENST00000638016 ALBP02768 609 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 C8GP07360 202 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 EZRP15311 586 aaKnown RBP16.87■□□□□ 0.29
PNKP-230ENST00000638016 SAT1P21673 171 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 FBLP22087 321 aaKnown RBP16.87■□□□□ 0.29
PNKP-230ENST00000638016 UQCRFS1P47985 274 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 EFNA3P52797 238 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 MAT1AQ00266 395 aaKnown RBP16.87■□□□□ 0.29
PNKP-230ENST00000638016 KLC1Q07866 573 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 PDAP1Q13442 181 aaKnown RBP16.87■□□□□ 0.29
PNKP-230ENST00000638016 NAE1Q13564 534 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 NAA25Q14CX7 972 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 MUM1Q2TAK8 710 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 SLC6A19Q695T7 634 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 AGTRAPQ6RW13 159 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 PRSS41Q7RTY9 318 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 VN1R4Q7Z5H5 301 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 GALNT7Q86SF2 657 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 AMER3Q8N944 861 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 CLEC1AQ8NC01 280 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 PYCR2Q96C36 320 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 C8orf44Q96CB5 159 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 CRB3Q9BUF7 120 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 PARVBQ9HBI1 364 aa16.87■□□□□ 0.29
PNKP-230ENST00000638016 ZGLP1P0C6A0 271 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 PIM1P11309 404 aaPredicted RBP16.86■□□□□ 0.29
PNKP-230ENST00000638016 CSNK1G2P78368 415 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 ABATP80404 500 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 SRSF1Q07955 248 aaKnown RBP eCLIP16.86■□□□□ 0.29
PNKP-230ENST00000638016 SP140Q13342 867 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 MYBPC3Q14896 1274 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 RBBP7Q16576 425 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 FAM45BPQ6NSW5 357 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 JMJD6Q6NYC1 403 aaPredicted RBP16.86■□□□□ 0.29
PNKP-230ENST00000638016 SYT10Q6XYQ8 523 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 ZC3HC1Q86WB0 502 aaKnown RBP16.86■□□□□ 0.29
PNKP-230ENST00000638016 ZBED8Q8IZ13 594 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 SPATA4Q8NEY3 305 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 FAM45AQ8TCE6 357 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 MCOLN3Q8TDD5 553 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 RERGQ96A58 199 aaPredicted RBP16.86■□□□□ 0.29
PNKP-230ENST00000638016 LRRC39Q96DD0 335 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 CCDC138Q96M89 665 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 IP6K3Q96PC2 410 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 YIPF2Q9BWQ6 316 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 UTP6Q9NYH9 597 aaKnown RBP16.86■□□□□ 0.29
PNKP-230ENST00000638016 VWA7Q9Y334 891 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 CSAG2Q9Y5P2 127 aa16.86■□□□□ 0.29
PNKP-230ENST00000638016 GUCA1CO95843 209 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 CD63P08962 238 aa16.85■□□□□ 0.29
PNKP-230ENST00000638016 CDH1P12830 882 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms