RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ENAMQ9NRM1 1142 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 P4HTMQ9NXG6 502 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 CDC23Q9UJX2 597 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 NXT1Q9UKK6 140 aaKnown RBP13.18□□□□□ -0.3
PNKP-228ENST00000637325 CDC14AQ9UNH5 594 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 UTP11Q9Y3A2 253 aaKnown RBP13.18□□□□□ -0.3
PNKP-228ENST00000637325 ZNF451Q9Y4E5 1061 aa13.18□□□□□ -0.3
PNKP-228ENST00000637325 PCSK5Q92824 1860 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 HAT1O14929 419 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 TP73O15350 636 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 ZIC2O95409 532 aaPredicted RBP13.17□□□□□ -0.3
PNKP-228ENST00000637325 PDGFAP04085 211 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 UMODP07911 640 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 ITGAXP20702 1163 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 FBLP22087 321 aaKnown RBP13.17□□□□□ -0.3
PNKP-228ENST00000637325 CCND1P24385 295 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 HRH2P25021 359 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 CSRP3P50461 194 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 TBPL1P62380 186 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 NAE1Q13564 534 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 NKG7Q16617 165 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 PRTGQ2VWP7 1150 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 AGTRAPQ6RW13 159 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 MBOAT1Q6ZNC8 495 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 SHISA6Q6ZSJ9 500 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 PPP1R32Q7Z5V6 425 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 SLC26A11Q86WA9 606 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 FDCSPQ8NFU4 85 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 VPS50Q96JG6 964 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 OLFM1Q99784 485 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 RAB17Q9H0T7 212 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 TMEM184CQ9NVA4 438 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 CUEDC1Q9NWM3 386 aaPredicted RBP13.17□□□□□ -0.3
PNKP-228ENST00000637325 ARL15Q9NXU5 204 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 NSMCE4AQ9NXX6 385 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 GPR83Q9NYM4 423 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 RUVBL1Q9Y265 456 aaKnown RBP13.17□□□□□ -0.3
PNKP-228ENST00000637325 PCDHGB7Q9Y5F8 929 aa13.17□□□□□ -0.3
PNKP-228ENST00000637325 FAM95CA0A1B0GW59 222 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 EIF3HO15372 352 aaKnown RBP eCLIP13.16□□□□□ -0.3
PNKP-228ENST00000637325 PRPF4O43172 522 aaKnown RBP eCLIP13.16□□□□□ -0.36e-7■■■■□ 23.2
PNKP-228ENST00000637325 KLHL41O60662 606 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 CEACAM4O75871 244 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 ANXA5P08758 320 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 MMP11P24347 488 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 PGGT1BP53609 377 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 EMP3P54852 163 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 SLC12A2P55011 1212 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 AP1S2P56377 157 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 RELAQ04206 551 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 CKAP4Q07065 602 aaKnown RBP13.16□□□□□ -0.3
PNKP-228ENST00000637325 RAPSNQ13702 412 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 RBBP7Q16576 425 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 NDUFA9Q16795 377 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 PHKG1Q16816 387 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 HKDC1Q2TB90 917 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 DCAF10Q5QP82 559 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 GARNL3Q5VVW2 1013 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 CAPN13Q6MZZ7 669 aaPredicted RBP13.16□□□□□ -0.3
PNKP-228ENST00000637325 COX15Q7KZN9 410 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 ZC3HC1Q86WB0 502 aaKnown RBP13.16□□□□□ -0.3
PNKP-228ENST00000637325 C17orf64Q86WR6 236 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 PLD3Q8IV08 490 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 DTWD1Q8N5C7 304 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 ATL1Q8WXF7 558 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 CDKL2Q92772 493 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 MIEF2Q96C03 454 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 VPS39Q96JC1 886 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 C10orf90Q96M02 699 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 OR2A5Q96R48 311 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 SLC26A1Q9H2B4 701 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 CLMPQ9H6B4 373 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 ATP13A2Q9NQ11 1180 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 MOCS1Q9NZB8 636 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 TXNDC16Q9P2K2 825 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 CTSFQ9UBX1 484 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 ZNF282Q9UDV7 671 aaPredicted RBP13.16□□□□□ -0.3
PNKP-228ENST00000637325 PSAT1Q9Y617 370 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 ESPL1Q14674 2120 aa13.16□□□□□ -0.3
PNKP-228ENST00000637325 AGPSO00116 658 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 DPM1O60762 260 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 MED26O95402 600 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 GUCA1CO95843 209 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 TSPAN12O95859 305 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 SSTR1P30872 391 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 GRK3P35626 688 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 PLTPP55058 493 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 RPS15AP62244 130 aaKnown RBP13.15□□□□□ -0.3
PNKP-228ENST00000637325 CAV1Q03135 178 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 ILF2Q12905 390 aaKnown RBP13.15□□□□□ -0.3
PNKP-228ENST00000637325 DUPD1Q68J44 220 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 LCTLQ6UWM7 567 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 PRSS58Q8IYP2 241 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 NKAPQ8N5F7 415 aaKnown RBP13.15□□□□□ -0.3
PNKP-228ENST00000637325 STT3BQ8TCJ2 826 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 NACC2Q96BF6 587 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 MVB12AQ96EY5 273 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 MMABQ96EY8 250 aaPredicted RBP13.15□□□□□ -0.3
PNKP-228ENST00000637325 SPSB2Q99619 263 aa13.15□□□□□ -0.3
PNKP-228ENST00000637325 HAUS8Q9BT25 410 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms