RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 FGF3P11487 239 aaPredicted RBP15.35■□□□□ 0.05
CLN6-216ENST00000636876 CCL4P13236 92 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 HGFP14210 728 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 EPB42P16452 691 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 IMPDH1P20839 514 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 TSPAN7P41732 249 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 ETV4P43268 484 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 GABRA4P48169 554 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 CCR8P51685 355 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 DNAJB13P59910 316 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 CSNK1G2P78368 415 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 MC2RQ01718 297 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 ACY1Q03154 408 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 GTF2H2Q13888 395 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 PCLAFQ15004 111 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 C3orf38Q5JPI3 329 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 ZNF678Q5SXM1 525 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 CATSPEREQ5SY80 951 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 GTF2H2CQ6P1K8 395 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 SLCO4C1Q6ZQN7 724 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 GOLGA7Q7Z5G4 137 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 TMPRSS11BQ86T26 416 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 OR4K1Q8NGD4 311 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 ZNF483Q8TF39 744 aaPredicted RBP15.35■□□□□ 0.05
CLN6-216ENST00000636876 L3HYPDHQ96EM0 354 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 TMEM237Q96Q45 408 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 OXSMQ9NWU1 459 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 SATB2Q9UPW6 733 aa15.35■□□□□ 0.05
CLN6-216ENST00000636876 FAM208BQ5VWN6 2430 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 TMEM120BA0PK00 339 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 ATP8B1O43520 1251 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 PRAMEF4O60810 478 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 JMJD7P0C870 316 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 C1GALT1C1LP0DN25 315 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 EZRP15311 586 aaKnown RBP15.34■□□□□ 0.05
CLN6-216ENST00000636876 SPINK2P20155 84 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 ETV5P41161 510 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 RELAQ04206 551 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 PCDH1Q08174 1060 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 CAMK2BQ13554 666 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 GPR19Q15760 415 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 UNC50Q53HI1 259 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 ZC3H12BQ5HYM0 836 aaKnown RBP15.34■□□□□ 0.05
CLN6-216ENST00000636876 PRAMEF9Q5VWM5 478 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 ATG9BQ674R7 924 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 RNF44Q7L0R7 432 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 C10orf107Q8IVU9 208 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 NSUN5Q96P11 429 aaKnown RBP15.34■□□□□ 0.05
CLN6-216ENST00000636876 OR6C1Q96RD1 312 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 SCNM1Q9BWG6 230 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 EHD1Q9H4M9 534 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 POLR1BQ9H9Y6 1135 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 FBXO8Q9NRD0 319 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 FGF21Q9NSA1 209 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 PISDQ9UG56 409 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 PILRAQ9UKJ1 303 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 PLCL2Q9UPR0 1127 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 NEUROG3Q9Y4Z2 214 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 PCDHGA8Q9Y5G5 932 aa15.34■□□□□ 0.05
CLN6-216ENST00000636876 HCRTR1O43613 425 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 KATNA1O75449 491 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 SPTBP11277 2137 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 ITIH1P19827 911 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 ALDH3A1P30838 453 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 CASP2P42575 452 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 SLC18A1P54219 525 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 GABREP78334 506 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 REEP5Q00765 189 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 IRF8Q02556 426 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 FOXM1Q08050 763 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 TUBB3Q13509 450 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 DOC2AQ14183 400 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 TBCCQ15814 346 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 DEFB110Q30KQ9 67 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 LIPMQ5VYY2 423 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 FBXO42Q6P3S6 717 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 CYB5D1Q6P9G0 228 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 FOXR1Q6PIV2 292 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 RPS27LQ71UM5 84 aaKnown RBP15.33■□□□□ 0.04
CLN6-216ENST00000636876 PLD3Q8IV08 490 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 MCATQ8IVS2 390 aaKnown RBP15.33■□□□□ 0.04
CLN6-216ENST00000636876 CCNYL1Q8N7R7 359 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 ANKRD42Q8N9B4 389 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 PPP4R1Q8TF05 950 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 N4BP2L2Q92802 583 aaPredicted RBP15.33■□□□□ 0.04
CLN6-216ENST00000636876 ZNF501Q96CX3 271 aaPredicted RBP15.33■□□□□ 0.04
CLN6-216ENST00000636876 WDR34Q96EX3 536 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 PRR11Q96HE9 360 aaPredicted RBP15.33■□□□□ 0.04
CLN6-216ENST00000636876 ZFYVE21Q9BQ24 234 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 AIF1LQ9BQI0 150 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 MECRQ9BV79 373 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 NRSN2Q9GZP1 204 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 SPNS1Q9H2V7 528 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 IPPKQ9H8X2 491 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 FANCEQ9HB96 536 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 ZBTB26Q9HCK0 441 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 SLC39A1Q9NY26 324 aa15.33■□□□□ 0.04
CLN6-216ENST00000636876 CACNA1GO43497 2377 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 A0A0J9YVX5 310 aa15.32■□□□□ 0.04
CLN6-216ENST00000636876 TRBC2A0A5B9 178 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms