RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 AIREO43918 545 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SCELO95171 688 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CHRNA1P02708 482 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 MATN1P21941 496 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SMSP52788 366 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CDH11P55287 796 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 IL10RBQ08334 325 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 NFE2L1Q14494 772 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 DPYSL2Q16555 572 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 DPY19L1Q2PZI1 675 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 FAM214AQ32MH5 1076 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SLC16A9Q7RTY1 509 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 VSIG10LQ86VR7 867 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 PHF13Q86YI8 300 aaPredicted RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 RCBTB1Q8NDN9 531 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 GAB3Q8WWW8 586 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 P2RY11Q96G91 374 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 POLE4Q9NR33 117 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 GNG8Q9UK08 70 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CYP3A7-CYP3A51PA0A087WV96 503 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SOX1O00570 391 aaPredicted RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 PCDH7O60245 1069 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 MT-CO2P00403 227 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ALDOAP04075 364 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 IFNA4P05014 189 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 HEXAP06865 529 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 VAMP1P23763 118 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CYP3A7P24462 503 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 RPP30P78346 268 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SPPL2CQ8IUH8 684 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 KIAA0895Q8NCT3 520 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CYP2W1Q8TAV3 490 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 HMCESQ96FZ2 354 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SLC25A51Q9H1U9 297 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 TLR9Q9NR96 1032 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 TUBA8Q9NY65 449 aaPredicted RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 TVP23BQ9NYZ1 205 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SUSD2Q9UGT4 822 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 GPR160Q9UJ42 338 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 UTS2RQ9UKP6 389 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 RAB21Q9UL25 225 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 FCF1Q9Y324 198 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 A0A0G2JPF8 293 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 HNRNPCL3B7ZW38 293 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 BLOC1S5-TXNDC5H3BN57 136 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 DUX1O43812 170 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 LYPLA1O75608 230 aaPredicted RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 OXSR1O95747 527 aaPredicted RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 IFNA10P01566 189 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 EIF4EP06730 217 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 FHP07954 510 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CD3GP09693 182 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 HNRNPCL4P0DMR1 293 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CD44P16070 742 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 MSR1P21757 451 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 RPL5P46777 297 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 CLCQ05315 142 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SCARB2Q14108 478 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 RCAN2Q14206 197 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 PON3Q15166 354 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 IQCCQ4KMZ1 466 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 RBM20Q5T481 1227 aaKnown RBP5.42□□□□□ -1.54
SCN1A-209ENST00000635750 BRAT1Q6PJG6 821 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 SMIM15Q7Z3B0 74 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF366Q8N895 744 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 TOR1AIP2Q8NFQ8 470 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 KCTD13Q8WZ19 329 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 LPGAT1Q92604 370 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 KCTD7Q96MP8 289 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 TM9SF2Q99805 663 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 G6PC3Q9BUM1 346 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 NLGN3Q9NZ94 848 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 PCYOX1Q9UHG3 505 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 FADS3Q9Y5Q0 445 aa5.42□□□□□ -1.54
SCN1A-209ENST00000635750 E7ENX8 843 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 SSX5O60225 188 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 IFNA7P01567 189 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 FBLP22087 321 aaKnown RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 CRHR1P34998 444 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 RFC2P35250 354 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 IFI35P80217 286 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 CYP2U1Q7Z449 544 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 PDSS2Q86YH6 399 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 OSTF1Q92882 214 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 LENG1Q96BZ8 264 aaPredicted RBP5.41□□□□□ -1.54
SCN1A-209ENST00000635750 OR5B12Q96R08 314 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 OR1F2PQ96R84 312 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 TTYH2Q9BSA4 534 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ABRACLQ9P1F3 81 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 SLC22A14Q9Y267 594 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 A0A087WUU8 490 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 A0A1W2PRB8 838 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 KCNU1A8MYU2 1149 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 TSPAN4O14817 238 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 DIRAS3O95661 229 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 LATS1O95835 1130 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 ESR1P03372 595 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 P04436 131 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 GPIP06744 558 aa5.41□□□□□ -1.54
SCN1A-209ENST00000635750 POU2F1P14859 743 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms