RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 FBXO25Q8TCJ0 367 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 FER1L6-AS2Q96M78 137 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 CPNE1Q99829 537 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 MLXIPLQ9NP71 852 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 ARL15Q9NXU5 204 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 DOCK10Q96BY6 2186 aa21.34■■□□□ 1.01
SF1-220ENST00000626028 TNRC6AQ8NDV7 1962 aaKnown RBP21.34■■□□□ 1.01
SF1-220ENST00000626028 TCRBV9S1A1TA0A576 114 aa21.33■■□□□ 1.01
SF1-220ENST00000626028 KLHL41O60662 606 aa21.33■■□□□ 1.01
SF1-220ENST00000626028 CEACAM4O75871 244 aa21.33■■□□□ 1.01
SF1-220ENST00000626028 URI1O94763 535 aaPredicted RBP21.33■■□□□ 1.01
SF1-220ENST00000626028 ITGAXP20702 1163 aa21.33■■□□□ 1.01
SF1-220ENST00000626028 SSTR1P30872 391 aa21.33■■□□□ 1.01
SF1-220ENST00000626028 RPS15AP62244 130 aaKnown RBP21.33■■□□□ 1.01
SF1-220ENST00000626028 CAPN13Q6MZZ7 669 aaPredicted RBP21.33■■□□□ 1.01
SF1-220ENST00000626028 MRGPREQ86SM8 312 aa21.33■■□□□ 1.01
SF1-220ENST00000626028 C17orf64Q86WR6 236 aa21.33■■□□□ 1.01
SF1-220ENST00000626028 HPS6Q86YV9 775 aa21.33■■□□□ 1.01
SF1-220ENST00000626028 CSNK1A1LQ8N752 337 aa21.33■■□□□ 1.01
SF1-220ENST00000626028 OR56A3Q8NH54 315 aa21.33■■□□□ 1.01
SF1-220ENST00000626028 FBXL8Q96CD0 374 aa21.33■■□□□ 1.01
SF1-220ENST00000626028 VPS50Q96JG6 964 aa21.33■■□□□ 1.01
SF1-220ENST00000626028 ZNF304Q9HCX3 659 aa21.33■■□□□ 1.01
SF1-220ENST00000626028 ARGFXA6NJG6 315 aa21.32■■□□□ 1
SF1-220ENST00000626028 FAM159BA6NKW6 160 aa21.32■■□□□ 1
SF1-220ENST00000626028 J3QKU1 62 aa21.32■■□□□ 1
SF1-220ENST00000626028 PEX12O00623 359 aa21.32■■□□□ 1
SF1-220ENST00000626028 SLC28A2O43868 658 aa21.32■■□□□ 1
SF1-220ENST00000626028 NRP2O60462 931 aa21.32■■□□□ 1
SF1-220ENST00000626028 EIF2S1P05198 315 aaKnown RBP21.32■■□□□ 1
SF1-220ENST00000626028 SLC12A2P55011 1212 aa21.32■■□□□ 1
SF1-220ENST00000626028 CDKL1Q00532 357 aa21.32■■□□□ 1
SF1-220ENST00000626028 FAM53BQ14153 422 aa21.32■■□□□ 1
SF1-220ENST00000626028 CEP128Q6ZU80 1094 aa21.32■■□□□ 1
SF1-220ENST00000626028 ADCK2Q7Z695 626 aa21.32■■□□□ 1
SF1-220ENST00000626028 MNS1Q8NEH6 495 aa21.32■■□□□ 1
SF1-220ENST00000626028 TSPAN17Q96FV3 270 aa21.32■■□□□ 1
SF1-220ENST00000626028 TP53TG5Q9Y2B4 290 aa21.32■■□□□ 1
SF1-220ENST00000626028 IGLV3-12A0A075B6K2 115 aa21.31■■□□□ 1
SF1-220ENST00000626028 VSTM2BA6NLU5 285 aa21.31■■□□□ 1
SF1-220ENST00000626028 H7BY64 318 aa21.31■■□□□ 1
SF1-220ENST00000626028 MMP11P24347 488 aa21.31■■□□□ 1
SF1-220ENST00000626028 GP5P40197 560 aa21.31■■□□□ 1
SF1-220ENST00000626028 HNMTP50135 292 aa21.31■■□□□ 1
SF1-220ENST00000626028 TAS2R39P59534 338 aa21.31■■□□□ 1
SF1-220ENST00000626028 NAB1Q13506 487 aa21.31■■□□□ 1
SF1-220ENST00000626028 NAE1Q13564 534 aa21.31■■□□□ 1
SF1-220ENST00000626028 NKG7Q16617 165 aa21.31■■□□□ 1
SF1-220ENST00000626028 SBSNQ6UWP8 590 aa21.31■■□□□ 1
SF1-220ENST00000626028 ZDHHC24Q6UX98 284 aa21.31■■□□□ 1
SF1-220ENST00000626028 PRICKLE2Q7Z3G6 844 aa21.31■■□□□ 1
SF1-220ENST00000626028 ADAMTSL2Q86TH1 951 aa21.31■■□□□ 1
SF1-220ENST00000626028 ABHD11Q8NFV4 315 aa21.31■■□□□ 1
SF1-220ENST00000626028 CABS1Q96KC9 395 aa21.31■■□□□ 1
SF1-220ENST00000626028 C10orf90Q96M02 699 aa21.31■■□□□ 1
SF1-220ENST00000626028 PRAP1Q96NZ9 151 aa21.31■■□□□ 1
SF1-220ENST00000626028 SLC25A23Q9BV35 468 aa21.31■■□□□ 1
SF1-220ENST00000626028 TRIM55Q9BYV6 548 aa21.31■■□□□ 1
SF1-220ENST00000626028 TSPYL1Q9H0U9 437 aa21.31■■□□□ 1
SF1-220ENST00000626028 ZNF282Q9UDV7 671 aaPredicted RBP21.31■■□□□ 1
SF1-220ENST00000626028 CNOT3O75175 753 aaKnown RBP21.3■■□□□ 1
SF1-220ENST00000626028 UMODP07911 640 aa21.3■■□□□ 1
SF1-220ENST00000626028 NPPBP16860 134 aa21.3■■□□□ 1
SF1-220ENST00000626028 OTX2P32243 289 aa21.3■■□□□ 1
SF1-220ENST00000626028 STX2P32856 288 aa21.3■■□□□ 1
SF1-220ENST00000626028 GRK3P35626 688 aa21.3■■□□□ 1
SF1-220ENST00000626028 CASRP41180 1078 aa21.3■■□□□ 1
SF1-220ENST00000626028 MAGEA4P43358 317 aa21.3■■□□□ 1
SF1-220ENST00000626028 PGDP52209 483 aa21.3■■□□□ 1
SF1-220ENST00000626028 KLRB1Q12918 225 aa21.3■■□□□ 1
SF1-220ENST00000626028 ATP1A4Q13733 1029 aa21.3■■□□□ 1
SF1-220ENST00000626028 DSG2Q14126 1118 aa21.3■■□□□ 1
SF1-220ENST00000626028 SLC9A5Q14940 896 aa21.3■■□□□ 1
SF1-220ENST00000626028 NDUFA9Q16795 377 aa21.3■■□□□ 1
SF1-220ENST00000626028 PPP1R3AQ16821 1122 aa21.3■■□□□ 1
SF1-220ENST00000626028 FAM69BQ5VUD6 431 aa21.3■■□□□ 1
SF1-220ENST00000626028 CPZQ66K79 652 aa21.3■■□□□ 1
SF1-220ENST00000626028 TMEM207Q6UWW9 146 aa21.3■■□□□ 1
SF1-220ENST00000626028 ASB18Q6ZVZ8 466 aa21.3■■□□□ 1
SF1-220ENST00000626028 COX15Q7KZN9 410 aa21.3■■□□□ 1
SF1-220ENST00000626028 CLEC1AQ8NC01 280 aa21.3■■□□□ 1
SF1-220ENST00000626028 SPSB2Q99619 263 aa21.3■■□□□ 1
SF1-220ENST00000626028 GPR22Q99680 433 aa21.3■■□□□ 1
SF1-220ENST00000626028 RBBP8Q99708 897 aa21.3■■□□□ 1
SF1-220ENST00000626028 SARGQ9BW04 601 aa21.3■■□□□ 1
SF1-220ENST00000626028 ATG10Q9H0Y0 220 aa21.3■■□□□ 1
SF1-220ENST00000626028 GPAMQ9HCL2 828 aa21.3■■□□□ 1
SF1-220ENST00000626028 ZNF71Q9NQZ8 489 aaPredicted RBP21.3■■□□□ 1
SF1-220ENST00000626028 SMYD2Q9NRG4 433 aa21.3■■□□□ 1
SF1-220ENST00000626028 SEMA3GQ9NS98 782 aa21.3■■□□□ 1
SF1-220ENST00000626028 CUEDC1Q9NWM3 386 aaPredicted RBP21.3■■□□□ 1
SF1-220ENST00000626028 RUVBL1Q9Y265 456 aaKnown RBP21.3■■□□□ 1
SF1-220ENST00000626028 PCSK5Q92824 1860 aa21.29■■□□□ 1
SF1-220ENST00000626028 AGPSO00116 658 aa21.29■■□□□ 1
SF1-220ENST00000626028 PCDH17O14917 1159 aa21.29■■□□□ 1
SF1-220ENST00000626028 HAT1O14929 419 aa21.29■■□□□ 1
SF1-220ENST00000626028 DNAJB5O75953 348 aa21.29■■□□□ 1
SF1-220ENST00000626028 SOX8P57073 446 aa21.29■■□□□ 1
SF1-220ENST00000626028 GPX6P59796 221 aa21.29■■□□□ 1
SF1-220ENST00000626028 OCA2Q04671 838 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms