RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CD86P42081 329 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 COX10Q12887 443 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 CUL4AQ13619 759 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 RAPSNQ13702 412 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 MTF1Q14872 753 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 C15orf59Q2T9L4 293 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-229ENST00000621897 ODF2Q5BJF6 829 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 GALNT17Q6IS24 598 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 UGT3A1Q6NUS8 523 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 ZNF774Q6NX45 483 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 OTUD6AQ7L8S5 288 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 NLRP14Q86W24 1093 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 CATSPERDQ86XM0 798 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 MINDY1Q8N5J2 469 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 NAT8LQ8N9F0 302 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 THAP8Q8NA92 274 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 APOBEC4Q8WW27 367 aaKnown RBP3.63□□□□□ -1.83
BRCA1-229ENST00000621897 GIMAP1Q8WWP7 306 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 SLAMF9Q96A28 289 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 NXNL1Q96CM4 212 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 PRICKLE1Q96MT3 831 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-229ENST00000621897 CCDC3Q9BQI4 270 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 DESI2Q9BSY9 194 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 EDEM3Q9BZQ6 932 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 TRIM6Q9C030 488 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-229ENST00000621897 GOLPH3LQ9H4A5 285 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 XAB2Q9HCS7 855 aaKnown RBP3.63□□□□□ -1.83
BRCA1-229ENST00000621897 MYNNQ9NPC7 610 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 PPANQ9NQ55 473 aaKnown RBP3.63□□□□□ -1.83
BRCA1-229ENST00000621897 GIMAP4Q9NUV9 329 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 CRNNQ9UBG3 495 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-229ENST00000621897 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.63□□□□□ -1.83
BRCA1-229ENST00000621897 PCDHGB4Q9UN71 923 aa3.63□□□□□ -1.83
BRCA1-229ENST00000621897 CROCCQ5TZA2 2017 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 SYNJ2BP-COX16A0A087WUM0 186 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 A0A1W2PPR1 153 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 FPGTO14772 594 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 EPHB6O15197 1021 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 TSPAN9O75954 239 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 C22orf31O95567 290 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 TRUB2O95900 331 aaKnown RBP3.62□□□□□ -1.83
BRCA1-229ENST00000621897 THEGLP0DJG4 465 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 SLC2A2P11168 524 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-229ENST00000621897 SAT1P21673 171 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 CSTF2P33240 577 aaKnown RBP eCLIP3.62□□□□□ -1.83
BRCA1-229ENST00000621897 TRPC1P48995 793 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 LIMK1P53667 647 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 EVCP57679 992 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 HMGN5P82970 282 aaKnown RBP3.62□□□□□ -1.83
BRCA1-229ENST00000621897 GUCY2DQ02846 1103 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 CALD1Q05682 793 aaKnown RBP3.62□□□□□ -1.83
BRCA1-229ENST00000621897 LRRC74AQ0VAA2 488 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 ELAVL2Q12926 359 aaKnown RBP3.62□□□□□ -1.83
BRCA1-229ENST00000621897 BECN1Q14457 450 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 FASTKD3Q14CZ7 662 aaKnown RBP3.62□□□□□ -1.83
BRCA1-229ENST00000621897 ZKSCAN8Q15776 578 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-229ENST00000621897 NTRK2Q16620 822 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 SLC35D3Q5M8T2 416 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 LCN1P1Q5VSP4 162 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 C11orf63Q6NUN7 778 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 RAPH1Q70E73 1250 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 G2E3Q7L622 706 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 SH2D6Q7Z4S9 175 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 CDC20BQ86Y33 519 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 TAGAPQ8N103 731 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 AVL9Q8NBF6 648 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 AQP11Q8NBQ7 271 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 OR6S1Q8NH40 331 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 CFAP61Q8NHU2 1237 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 C11orf45Q8TAV5 145 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 PRPF31Q8WWY3 499 aaKnown RBP3.62□□□□□ -1.83
BRCA1-229ENST00000621897 TMCO6Q96DC7 493 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 SFXN2Q96NB2 322 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 SOSTQ9BQB4 213 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 GRPEL1Q9HAV7 217 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 PDE7BQ9NP56 450 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 ABT1Q9ULW3 272 aaKnown RBP3.62□□□□□ -1.83
BRCA1-229ENST00000621897 MTF2Q9Y483 593 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-229ENST00000621897 ADAMTS9Q9P2N4 1935 aa3.62□□□□□ -1.83
BRCA1-229ENST00000621897 EIF4G1Q04637 1599 aaKnown RBP3.61□□□□□ -1.83
BRCA1-229ENST00000621897 FAM25EA8MYX2 175 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 H0Y626 953 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 PES1O00541 588 aaKnown RBP3.61□□□□□ -1.83
BRCA1-229ENST00000621897 MPHOSPH10O00566 681 aaKnown RBP3.61□□□□□ -1.83
BRCA1-229ENST00000621897 NDC80O14777 642 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 TGDSO95455 350 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 IGHV2-70P01814 119 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 ACTN2P35609 894 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 EIF2DP41214 584 aaKnown RBP3.61□□□□□ -1.83
BRCA1-229ENST00000621897 MATR3P43243 847 aaKnown RBP eCLIP3.61□□□□□ -1.83
BRCA1-229ENST00000621897 ALDH3A2P51648 485 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 MAPK12P53778 367 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 CYCSP99999 105 aaKnown RBP3.61□□□□□ -1.83
BRCA1-229ENST00000621897 MS4A2Q01362 244 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 UBXN1Q04323 297 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 BAATQ14032 418 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-229ENST00000621897 LY6DQ14210 128 aa3.61□□□□□ -1.83
BRCA1-229ENST00000621897 EXT1Q16394 746 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms