RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 SQLEQ14534 574 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 TMEM249Q2WGJ8 235 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 CCDC40Q4G0X9 1142 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 WLSQ5T9L3 541 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 ALG1LQ6GMV1 187 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 LANCL3Q6ZV70 420 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 CPEB2Q7Z5Q1 589 aaKnown RBP9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 BTLAQ7Z6A9 289 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 ZNF653Q96CK0 615 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 PIK3IP1Q96FE7 263 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 FAM81BQ96LP2 452 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 SELENOSQ9BQE4 189 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 CCM2Q9BSQ5 444 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 YIPF2Q9BWQ6 316 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 RBSNQ9H1K0 784 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 MMP25Q9NPA2 562 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 ALKBH4Q9NXW9 302 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 SHOC2Q9UQ13 582 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 TESMINQ9Y4I5 508 aa9.53□□□□□ -0.88
AP003900.1-202ENST00000616952 ANKRD66B4E2M5 251 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 ACOT7O00154 380 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 AQP7O14520 342 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 NDC80O14777 642 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 TMPRSS2O15393 492 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 GPR39O43194 453 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 CCP110O43303 1012 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 IGHG3P01860 377 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 PNMA6AP0CW24 399 aaPredicted RBP9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 GPD1P21695 349 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 SHMT2P34897 504 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 CDH6P55285 790 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 TAS2R50P59544 299 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 PPIAP62937 165 aaKnown RBP9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 ACTG1P63261 375 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 PRKG2Q13237 762 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 EXT1Q16394 746 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 TRIM65Q6PJ69 517 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 UNC5AQ6ZN44 842 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 ABHD13Q7L211 337 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 ATPAF2Q8N5M1 289 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 DDHD1Q8NEL9 900 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 TNIP2Q8NFZ5 429 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 M1APQ8TC57 530 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 METTL21AQ8WXB1 218 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 CPA5Q8WXQ8 436 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 PIGQQ9BRB3 760 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 TGIF2Q9GZN2 237 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 CDCP1Q9H5V8 836 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 MVB12BQ9H7P6 319 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 TRMT1Q9NXH9 659 aaKnown RBP9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 AP4E1Q9UPM8 1137 aa9.52□□□□□ -0.89
AP003900.1-202ENST00000616952 DSCAMO60469 2012 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 ZNF407Q9C0G0 2248 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 A0A1B0GVC2 190 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 SLC16A5O15375 505 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 PRPF4O43172 522 aaKnown RBP eCLIP9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 CTIFO43310 598 aaKnown RBP9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 YEATS4O95619 227 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 PIRTP0C851 137 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 ZNF16P17020 682 aaPredicted RBP9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 IGFBP5P24593 272 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 CEACAM8P31997 349 aaPredicted RBP9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 TRHRP34981 398 aaPredicted RBP9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 IDUAP35475 653 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 HLCSP50747 726 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 ZNF136P52737 540 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 NOMO3P69849 1222 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 BOP1Q14137 746 aaKnown RBP9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 CA9Q16790 459 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 LONRF2Q1L5Z9 754 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 ZC3H12BQ5HYM0 836 aaKnown RBP9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 LDLRAP1Q5SW96 308 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 NAA35Q5VZE5 725 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 TRILQ7L0X0 811 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 DET1Q7L5Y6 550 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 TMC3Q7Z5M5 1100 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 ZC3H7AQ8IWR0 971 aaKnown RBP9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 ALDH16A1Q8IZ83 802 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 TEX26Q8N6G2 289 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 PHC3Q8NDX5 983 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 XPO4Q9C0E2 1151 aaKnown RBP9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 ASB8Q9H765 288 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 MKKSQ9NPJ1 570 aaPredicted RBP9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 JKAMPQ9P055 326 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 C19orf25Q9UFG5 118 aaPredicted RBP9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 ZNF711Q9Y462 761 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 TTLL3Q9Y4R7 772 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 NFS1Q9Y697 457 aa9.51□□□□□ -0.89
AP003900.1-202ENST00000616952 ISM1B1AKI9 464 aa9.5□□□□□ -0.89
AP003900.1-202ENST00000616952 IFRD1O00458 451 aaPredicted RBP9.5□□□□□ -0.89
AP003900.1-202ENST00000616952 TMIGD3P0DMS9 266 aaPredicted RBP9.5□□□□□ -0.89
AP003900.1-202ENST00000616952 PEBP1P30086 187 aaKnown RBP9.5□□□□□ -0.89
AP003900.1-202ENST00000616952 ACVR1BP36896 505 aa9.5□□□□□ -0.89
AP003900.1-202ENST00000616952 CCNFP41002 786 aa9.5□□□□□ -0.89
AP003900.1-202ENST00000616952 GRIA3P42263 894 aa9.5□□□□□ -0.89
AP003900.1-202ENST00000616952 WNT3P56703 355 aa9.5□□□□□ -0.89
AP003900.1-202ENST00000616952 VLDLRP98155 873 aa9.5□□□□□ -0.89
AP003900.1-202ENST00000616952 PLGLB1Q02325 96 aa9.5□□□□□ -0.89
AP003900.1-202ENST00000616952 LRRC63Q05C16 580 aa9.5□□□□□ -0.89
AP003900.1-202ENST00000616952 WASHC2DQ5SRD0 308 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms